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CCL3L3-null status is associated with susceptibility to systemic lupus erythematosus

The correlation between copy number variation (CNV) and the susceptibility to systemic lupus erythematosus (SLE) has been reported for various immunity-related genes. However, the contribution of CNVs to SLE susceptibility awaits more investigation. To evaluate the copy numbers in immunity-related g...

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Autores principales: Kim, Young-Ho, Lee, Eunyoung Emily, Sim, Hye-Won, Kang, Eun-Kyung, Won, Yoon-Ho, Lee, Dong-eun, Hong, Kyeong-Man, Song, Yeong-Wook
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8476559/
https://www.ncbi.nlm.nih.gov/pubmed/34580371
http://dx.doi.org/10.1038/s41598-021-98531-6
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author Kim, Young-Ho
Lee, Eunyoung Emily
Sim, Hye-Won
Kang, Eun-Kyung
Won, Yoon-Ho
Lee, Dong-eun
Hong, Kyeong-Man
Song, Yeong-Wook
author_facet Kim, Young-Ho
Lee, Eunyoung Emily
Sim, Hye-Won
Kang, Eun-Kyung
Won, Yoon-Ho
Lee, Dong-eun
Hong, Kyeong-Man
Song, Yeong-Wook
author_sort Kim, Young-Ho
collection PubMed
description The correlation between copy number variation (CNV) and the susceptibility to systemic lupus erythematosus (SLE) has been reported for various immunity-related genes. However, the contribution of CNVs to SLE susceptibility awaits more investigation. To evaluate the copy numbers in immunity-related genes such as TNFAIP3, TNIP1, IL12B, TBX21 (T-bet), TLR7, C4A, C4B, CCL3L1, and CCL3L3, the modified real competitive polymerase chain reaction (mrcPCR) assay was employed, and the association between the copy numbers and SLE susceptibility was analyzed in 334 SLE patients and 338 controls. CCL3L3-null status was significantly associated with SLE susceptibility (OR > 18, P < 0.0001), which remained significant by Bonferroni’s correction (corrected P = 0.0007). However, the significant association between C4B low-copy status and SLE susceptibility (OR = 1.6051, P = 0.0331) became non-significant by Bonferroni’s correction (corrected P = 0.3938). Except for these results, no other significant association between SLE susceptibility and copy number status in other genes was observed. The CCL3L3-null status may be a significant factor for SLE susceptibility.
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spelling pubmed-84765592021-09-29 CCL3L3-null status is associated with susceptibility to systemic lupus erythematosus Kim, Young-Ho Lee, Eunyoung Emily Sim, Hye-Won Kang, Eun-Kyung Won, Yoon-Ho Lee, Dong-eun Hong, Kyeong-Man Song, Yeong-Wook Sci Rep Article The correlation between copy number variation (CNV) and the susceptibility to systemic lupus erythematosus (SLE) has been reported for various immunity-related genes. However, the contribution of CNVs to SLE susceptibility awaits more investigation. To evaluate the copy numbers in immunity-related genes such as TNFAIP3, TNIP1, IL12B, TBX21 (T-bet), TLR7, C4A, C4B, CCL3L1, and CCL3L3, the modified real competitive polymerase chain reaction (mrcPCR) assay was employed, and the association between the copy numbers and SLE susceptibility was analyzed in 334 SLE patients and 338 controls. CCL3L3-null status was significantly associated with SLE susceptibility (OR > 18, P < 0.0001), which remained significant by Bonferroni’s correction (corrected P = 0.0007). However, the significant association between C4B low-copy status and SLE susceptibility (OR = 1.6051, P = 0.0331) became non-significant by Bonferroni’s correction (corrected P = 0.3938). Except for these results, no other significant association between SLE susceptibility and copy number status in other genes was observed. The CCL3L3-null status may be a significant factor for SLE susceptibility. Nature Publishing Group UK 2021-09-27 /pmc/articles/PMC8476559/ /pubmed/34580371 http://dx.doi.org/10.1038/s41598-021-98531-6 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Kim, Young-Ho
Lee, Eunyoung Emily
Sim, Hye-Won
Kang, Eun-Kyung
Won, Yoon-Ho
Lee, Dong-eun
Hong, Kyeong-Man
Song, Yeong-Wook
CCL3L3-null status is associated with susceptibility to systemic lupus erythematosus
title CCL3L3-null status is associated with susceptibility to systemic lupus erythematosus
title_full CCL3L3-null status is associated with susceptibility to systemic lupus erythematosus
title_fullStr CCL3L3-null status is associated with susceptibility to systemic lupus erythematosus
title_full_unstemmed CCL3L3-null status is associated with susceptibility to systemic lupus erythematosus
title_short CCL3L3-null status is associated with susceptibility to systemic lupus erythematosus
title_sort ccl3l3-null status is associated with susceptibility to systemic lupus erythematosus
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8476559/
https://www.ncbi.nlm.nih.gov/pubmed/34580371
http://dx.doi.org/10.1038/s41598-021-98531-6
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