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Biomarkers of Blood from Patients with Atherosclerosis Based on Bioinformatics Analysis
Atherosclerosis is a multifaceted disease characterized by the formation and accumulation of plaques that attach to arteries and cause cardiovascular disease and vascular embolism. A range of diagnostic techniques, including selective coronary angiography, stress tests, computerized tomography, and...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8477683/ https://www.ncbi.nlm.nih.gov/pubmed/34594098 http://dx.doi.org/10.1177/11769343211046020 |
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author | Qian, Yongjiang Zhang, Lili Sun, Zhen Zang, Guangyao Li, Yalan Wang, Zhongqun Li, Lihua |
author_facet | Qian, Yongjiang Zhang, Lili Sun, Zhen Zang, Guangyao Li, Yalan Wang, Zhongqun Li, Lihua |
author_sort | Qian, Yongjiang |
collection | PubMed |
description | Atherosclerosis is a multifaceted disease characterized by the formation and accumulation of plaques that attach to arteries and cause cardiovascular disease and vascular embolism. A range of diagnostic techniques, including selective coronary angiography, stress tests, computerized tomography, and nuclear scans, assess cardiovascular disease risk and treatment targets. However, there is currently no simple blood biochemical index or biological target for the diagnosis of atherosclerosis. Therefore, it is of interest to find a biochemical blood marker for atherosclerosis. Three datasets from the Gene Expression Omnibus (GEO) database were analyzed to obtain differentially expressed genes (DEG) and the results were integrated using the Robustrankaggreg algorithm. The genes considered more critical by the Robustrankaggreg algorithm were put into their own data set and the data set system with cell classification information for verification. Twenty-one possible genes were screened out. Interestingly, we found a good correlation between RPS4Y1, EIF1AY, and XIST. In addition, we know the general expression of these genes in different cell types and whole blood cells. In this study, we identified BTNL8 and BLNK as having good clinical significance. These results will contribute to the analysis of the underlying genes involved in the progression of atherosclerosis and provide insights for the discovery of new diagnostic and evaluation methods. |
format | Online Article Text |
id | pubmed-8477683 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-84776832021-09-29 Biomarkers of Blood from Patients with Atherosclerosis Based on Bioinformatics Analysis Qian, Yongjiang Zhang, Lili Sun, Zhen Zang, Guangyao Li, Yalan Wang, Zhongqun Li, Lihua Evol Bioinform Online Original Research Atherosclerosis is a multifaceted disease characterized by the formation and accumulation of plaques that attach to arteries and cause cardiovascular disease and vascular embolism. A range of diagnostic techniques, including selective coronary angiography, stress tests, computerized tomography, and nuclear scans, assess cardiovascular disease risk and treatment targets. However, there is currently no simple blood biochemical index or biological target for the diagnosis of atherosclerosis. Therefore, it is of interest to find a biochemical blood marker for atherosclerosis. Three datasets from the Gene Expression Omnibus (GEO) database were analyzed to obtain differentially expressed genes (DEG) and the results were integrated using the Robustrankaggreg algorithm. The genes considered more critical by the Robustrankaggreg algorithm were put into their own data set and the data set system with cell classification information for verification. Twenty-one possible genes were screened out. Interestingly, we found a good correlation between RPS4Y1, EIF1AY, and XIST. In addition, we know the general expression of these genes in different cell types and whole blood cells. In this study, we identified BTNL8 and BLNK as having good clinical significance. These results will contribute to the analysis of the underlying genes involved in the progression of atherosclerosis and provide insights for the discovery of new diagnostic and evaluation methods. SAGE Publications 2021-09-24 /pmc/articles/PMC8477683/ /pubmed/34594098 http://dx.doi.org/10.1177/11769343211046020 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Research Qian, Yongjiang Zhang, Lili Sun, Zhen Zang, Guangyao Li, Yalan Wang, Zhongqun Li, Lihua Biomarkers of Blood from Patients with Atherosclerosis Based on Bioinformatics Analysis |
title | Biomarkers of Blood from Patients with Atherosclerosis Based on Bioinformatics Analysis |
title_full | Biomarkers of Blood from Patients with Atherosclerosis Based on Bioinformatics Analysis |
title_fullStr | Biomarkers of Blood from Patients with Atherosclerosis Based on Bioinformatics Analysis |
title_full_unstemmed | Biomarkers of Blood from Patients with Atherosclerosis Based on Bioinformatics Analysis |
title_short | Biomarkers of Blood from Patients with Atherosclerosis Based on Bioinformatics Analysis |
title_sort | biomarkers of blood from patients with atherosclerosis based on bioinformatics analysis |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8477683/ https://www.ncbi.nlm.nih.gov/pubmed/34594098 http://dx.doi.org/10.1177/11769343211046020 |
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