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Influence of social determinants of health and county vaccination rates on machine learning models to predict COVID-19 case growth in Tennessee

INTRODUCTION: The SARS-CoV-2 (COVID-19) pandemic has exposed health disparities throughout the USA, particularly among racial and ethnic minorities. As a result, there is a need for data-driven approaches to pinpoint the unique constellation of clinical and social determinants of health (SDOH) risk...

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Autores principales: Wylezinski, Lukasz S, Harris, Coleman R, Heiser, Cody N, Gray, Jamieson D, Spurlock, Charles F
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8478575/
https://www.ncbi.nlm.nih.gov/pubmed/34580088
http://dx.doi.org/10.1136/bmjhci-2021-100439
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author Wylezinski, Lukasz S
Harris, Coleman R
Heiser, Cody N
Gray, Jamieson D
Spurlock, Charles F
author_facet Wylezinski, Lukasz S
Harris, Coleman R
Heiser, Cody N
Gray, Jamieson D
Spurlock, Charles F
author_sort Wylezinski, Lukasz S
collection PubMed
description INTRODUCTION: The SARS-CoV-2 (COVID-19) pandemic has exposed health disparities throughout the USA, particularly among racial and ethnic minorities. As a result, there is a need for data-driven approaches to pinpoint the unique constellation of clinical and social determinants of health (SDOH) risk factors that give rise to poor patient outcomes following infection in US communities. METHODS: We combined county-level COVID-19 testing data, COVID-19 vaccination rates and SDOH information in Tennessee. Between February and May 2021, we trained machine learning models on a semimonthly basis using these datasets to predict COVID-19 incidence in Tennessee counties. We then analyzed SDOH data features at each time point to rank the impact of each feature on model performance. RESULTS: Our results indicate that COVID-19 vaccination rates play a crucial role in determining future COVID-19 disease risk. Beginning in mid-March 2021, higher vaccination rates significantly correlated with lower COVID-19 case growth predictions. Further, as the relative importance of COVID-19 vaccination data features grew, demographic SDOH features such as age, race and ethnicity decreased while the impact of socioeconomic and environmental factors, including access to healthcare and transportation, increased. CONCLUSION: Incorporating a data framework to track the evolving patterns of community-level SDOH risk factors could provide policy-makers with additional data resources to improve health equity and resilience to future public health emergencies.
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spelling pubmed-84785752021-09-29 Influence of social determinants of health and county vaccination rates on machine learning models to predict COVID-19 case growth in Tennessee Wylezinski, Lukasz S Harris, Coleman R Heiser, Cody N Gray, Jamieson D Spurlock, Charles F BMJ Health Care Inform Short Report INTRODUCTION: The SARS-CoV-2 (COVID-19) pandemic has exposed health disparities throughout the USA, particularly among racial and ethnic minorities. As a result, there is a need for data-driven approaches to pinpoint the unique constellation of clinical and social determinants of health (SDOH) risk factors that give rise to poor patient outcomes following infection in US communities. METHODS: We combined county-level COVID-19 testing data, COVID-19 vaccination rates and SDOH information in Tennessee. Between February and May 2021, we trained machine learning models on a semimonthly basis using these datasets to predict COVID-19 incidence in Tennessee counties. We then analyzed SDOH data features at each time point to rank the impact of each feature on model performance. RESULTS: Our results indicate that COVID-19 vaccination rates play a crucial role in determining future COVID-19 disease risk. Beginning in mid-March 2021, higher vaccination rates significantly correlated with lower COVID-19 case growth predictions. Further, as the relative importance of COVID-19 vaccination data features grew, demographic SDOH features such as age, race and ethnicity decreased while the impact of socioeconomic and environmental factors, including access to healthcare and transportation, increased. CONCLUSION: Incorporating a data framework to track the evolving patterns of community-level SDOH risk factors could provide policy-makers with additional data resources to improve health equity and resilience to future public health emergencies. BMJ Publishing Group 2021-09-27 /pmc/articles/PMC8478575/ /pubmed/34580088 http://dx.doi.org/10.1136/bmjhci-2021-100439 Text en © Author(s) (or their employer(s)) 2021. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited, appropriate credit is given, any changes made indicated, and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) .
spellingShingle Short Report
Wylezinski, Lukasz S
Harris, Coleman R
Heiser, Cody N
Gray, Jamieson D
Spurlock, Charles F
Influence of social determinants of health and county vaccination rates on machine learning models to predict COVID-19 case growth in Tennessee
title Influence of social determinants of health and county vaccination rates on machine learning models to predict COVID-19 case growth in Tennessee
title_full Influence of social determinants of health and county vaccination rates on machine learning models to predict COVID-19 case growth in Tennessee
title_fullStr Influence of social determinants of health and county vaccination rates on machine learning models to predict COVID-19 case growth in Tennessee
title_full_unstemmed Influence of social determinants of health and county vaccination rates on machine learning models to predict COVID-19 case growth in Tennessee
title_short Influence of social determinants of health and county vaccination rates on machine learning models to predict COVID-19 case growth in Tennessee
title_sort influence of social determinants of health and county vaccination rates on machine learning models to predict covid-19 case growth in tennessee
topic Short Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8478575/
https://www.ncbi.nlm.nih.gov/pubmed/34580088
http://dx.doi.org/10.1136/bmjhci-2021-100439
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