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Dynamic memory to alleviate catastrophic forgetting in continual learning with medical imaging

Medical imaging is a central part of clinical diagnosis and treatment guidance. Machine learning has increasingly gained relevance because it captures features of disease and treatment response that are relevant for therapeutic decision-making. In clinical practice, the continuous progress of image...

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Autores principales: Perkonigg, Matthias, Hofmanninger, Johannes, Herold, Christian J., Brink, James A., Pianykh, Oleg, Prosch, Helmut, Langs, Georg
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8479083/
https://www.ncbi.nlm.nih.gov/pubmed/34584080
http://dx.doi.org/10.1038/s41467-021-25858-z
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author Perkonigg, Matthias
Hofmanninger, Johannes
Herold, Christian J.
Brink, James A.
Pianykh, Oleg
Prosch, Helmut
Langs, Georg
author_facet Perkonigg, Matthias
Hofmanninger, Johannes
Herold, Christian J.
Brink, James A.
Pianykh, Oleg
Prosch, Helmut
Langs, Georg
author_sort Perkonigg, Matthias
collection PubMed
description Medical imaging is a central part of clinical diagnosis and treatment guidance. Machine learning has increasingly gained relevance because it captures features of disease and treatment response that are relevant for therapeutic decision-making. In clinical practice, the continuous progress of image acquisition technology or diagnostic procedures, the diversity of scanners, and evolving imaging protocols hamper the utility of machine learning, as prediction accuracy on new data deteriorates, or models become outdated due to these domain shifts. We propose a continual learning approach to deal with such domain shifts occurring at unknown time points. We adapt models to emerging variations in a continuous data stream while counteracting catastrophic forgetting. A dynamic memory enables rehearsal on a subset of diverse training data to mitigate forgetting while enabling models to expand to new domains. The technique balances memory by detecting pseudo-domains, representing different style clusters within the data stream. Evaluation of two different tasks, cardiac segmentation in magnetic resonance imaging and lung nodule detection in computed tomography, demonstrate a consistent advantage of the method.
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spelling pubmed-84790832021-10-22 Dynamic memory to alleviate catastrophic forgetting in continual learning with medical imaging Perkonigg, Matthias Hofmanninger, Johannes Herold, Christian J. Brink, James A. Pianykh, Oleg Prosch, Helmut Langs, Georg Nat Commun Article Medical imaging is a central part of clinical diagnosis and treatment guidance. Machine learning has increasingly gained relevance because it captures features of disease and treatment response that are relevant for therapeutic decision-making. In clinical practice, the continuous progress of image acquisition technology or diagnostic procedures, the diversity of scanners, and evolving imaging protocols hamper the utility of machine learning, as prediction accuracy on new data deteriorates, or models become outdated due to these domain shifts. We propose a continual learning approach to deal with such domain shifts occurring at unknown time points. We adapt models to emerging variations in a continuous data stream while counteracting catastrophic forgetting. A dynamic memory enables rehearsal on a subset of diverse training data to mitigate forgetting while enabling models to expand to new domains. The technique balances memory by detecting pseudo-domains, representing different style clusters within the data stream. Evaluation of two different tasks, cardiac segmentation in magnetic resonance imaging and lung nodule detection in computed tomography, demonstrate a consistent advantage of the method. Nature Publishing Group UK 2021-09-28 /pmc/articles/PMC8479083/ /pubmed/34584080 http://dx.doi.org/10.1038/s41467-021-25858-z Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Perkonigg, Matthias
Hofmanninger, Johannes
Herold, Christian J.
Brink, James A.
Pianykh, Oleg
Prosch, Helmut
Langs, Georg
Dynamic memory to alleviate catastrophic forgetting in continual learning with medical imaging
title Dynamic memory to alleviate catastrophic forgetting in continual learning with medical imaging
title_full Dynamic memory to alleviate catastrophic forgetting in continual learning with medical imaging
title_fullStr Dynamic memory to alleviate catastrophic forgetting in continual learning with medical imaging
title_full_unstemmed Dynamic memory to alleviate catastrophic forgetting in continual learning with medical imaging
title_short Dynamic memory to alleviate catastrophic forgetting in continual learning with medical imaging
title_sort dynamic memory to alleviate catastrophic forgetting in continual learning with medical imaging
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8479083/
https://www.ncbi.nlm.nih.gov/pubmed/34584080
http://dx.doi.org/10.1038/s41467-021-25858-z
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