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COVID-19 patients and Dementia: Frontal cortex transcriptomic data

Since the association of SARS-Cov-2 infection with Nervous System (NS) manifestations, we performed RNA-sequencing analysis in Frontal Cortex of COVID-19 positive or negative individuals and affected or not by Dementia individuals. We examined gene expression differences in individuals with COVID-19...

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Autores principales: Garofalo, Maria, Gagliardi, Stella, Zucca, Susanna, Pandini, Cecilia, Dragoni, Francesca, Sproviero, Daisy, Pansarasa, Orietta, Poloni, Tino Emanuele, Medici, Valentina, Davin, Annalisa, Visonà, Silvia Damiana, Moretti, Matteo, Guaita, Antonio, Ceroni, Mauro, Tronconi, Livio, Cereda, Cristina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8479506/
https://www.ncbi.nlm.nih.gov/pubmed/34604485
http://dx.doi.org/10.1016/j.dib.2021.107432
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author Garofalo, Maria
Gagliardi, Stella
Zucca, Susanna
Pandini, Cecilia
Dragoni, Francesca
Sproviero, Daisy
Pansarasa, Orietta
Poloni, Tino Emanuele
Medici, Valentina
Davin, Annalisa
Visonà, Silvia Damiana
Moretti, Matteo
Guaita, Antonio
Ceroni, Mauro
Tronconi, Livio
Cereda, Cristina
author_facet Garofalo, Maria
Gagliardi, Stella
Zucca, Susanna
Pandini, Cecilia
Dragoni, Francesca
Sproviero, Daisy
Pansarasa, Orietta
Poloni, Tino Emanuele
Medici, Valentina
Davin, Annalisa
Visonà, Silvia Damiana
Moretti, Matteo
Guaita, Antonio
Ceroni, Mauro
Tronconi, Livio
Cereda, Cristina
author_sort Garofalo, Maria
collection PubMed
description Since the association of SARS-Cov-2 infection with Nervous System (NS) manifestations, we performed RNA-sequencing analysis in Frontal Cortex of COVID-19 positive or negative individuals and affected or not by Dementia individuals. We examined gene expression differences in individuals with COVID-19 and Dementia compared to Dementia only patients by collecting transcript counts in each sample and performing Differential Expression analysis. We found eleven genes satisfying our significance criteria, all of them being protein coding genes. These data are suitable for integration with supplemental samples and for analysis according to different individuals’ classification. Also, differential expression evaluation may be implemented with other scientific purposes, such as research of unannotated genes, mRNA splicing and genes isoforms. The analysis of Differential Expressed genes in COVID-19 positive patients compared to non-COVID-19 patients is published in: S. Gagliardi, E.T. Poloni, C. Pandini, M. Garofalo, F. Dragoni, V. Medici, A. Davin, S.D. Visonà, M. Moretti, D. Sproviero, O. Pansarasa, A. Guaita, M. Ceroni, L. Tronconi, C. Cereda, Detection of SARS-CoV-2 genome and whole transcriptome sequencing in frontal cortex of COVID-19 patients., Brain. Behav. Immun. (2021). https://doi.org/10.1016/j.bbi.2021.05.012.
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spelling pubmed-84795062021-09-29 COVID-19 patients and Dementia: Frontal cortex transcriptomic data Garofalo, Maria Gagliardi, Stella Zucca, Susanna Pandini, Cecilia Dragoni, Francesca Sproviero, Daisy Pansarasa, Orietta Poloni, Tino Emanuele Medici, Valentina Davin, Annalisa Visonà, Silvia Damiana Moretti, Matteo Guaita, Antonio Ceroni, Mauro Tronconi, Livio Cereda, Cristina Data Brief Data Article Since the association of SARS-Cov-2 infection with Nervous System (NS) manifestations, we performed RNA-sequencing analysis in Frontal Cortex of COVID-19 positive or negative individuals and affected or not by Dementia individuals. We examined gene expression differences in individuals with COVID-19 and Dementia compared to Dementia only patients by collecting transcript counts in each sample and performing Differential Expression analysis. We found eleven genes satisfying our significance criteria, all of them being protein coding genes. These data are suitable for integration with supplemental samples and for analysis according to different individuals’ classification. Also, differential expression evaluation may be implemented with other scientific purposes, such as research of unannotated genes, mRNA splicing and genes isoforms. The analysis of Differential Expressed genes in COVID-19 positive patients compared to non-COVID-19 patients is published in: S. Gagliardi, E.T. Poloni, C. Pandini, M. Garofalo, F. Dragoni, V. Medici, A. Davin, S.D. Visonà, M. Moretti, D. Sproviero, O. Pansarasa, A. Guaita, M. Ceroni, L. Tronconi, C. Cereda, Detection of SARS-CoV-2 genome and whole transcriptome sequencing in frontal cortex of COVID-19 patients., Brain. Behav. Immun. (2021). https://doi.org/10.1016/j.bbi.2021.05.012. Elsevier 2021-09-29 /pmc/articles/PMC8479506/ /pubmed/34604485 http://dx.doi.org/10.1016/j.dib.2021.107432 Text en © 2021 Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Garofalo, Maria
Gagliardi, Stella
Zucca, Susanna
Pandini, Cecilia
Dragoni, Francesca
Sproviero, Daisy
Pansarasa, Orietta
Poloni, Tino Emanuele
Medici, Valentina
Davin, Annalisa
Visonà, Silvia Damiana
Moretti, Matteo
Guaita, Antonio
Ceroni, Mauro
Tronconi, Livio
Cereda, Cristina
COVID-19 patients and Dementia: Frontal cortex transcriptomic data
title COVID-19 patients and Dementia: Frontal cortex transcriptomic data
title_full COVID-19 patients and Dementia: Frontal cortex transcriptomic data
title_fullStr COVID-19 patients and Dementia: Frontal cortex transcriptomic data
title_full_unstemmed COVID-19 patients and Dementia: Frontal cortex transcriptomic data
title_short COVID-19 patients and Dementia: Frontal cortex transcriptomic data
title_sort covid-19 patients and dementia: frontal cortex transcriptomic data
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8479506/
https://www.ncbi.nlm.nih.gov/pubmed/34604485
http://dx.doi.org/10.1016/j.dib.2021.107432
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