Cargando…
The More, the Merrier? Multiple Myoglobin Genes in Fish Species, Especially in Gray Bichir (Polypterus senegalus) and Reedfish (Erpetoichthys calabaricus)
The members of the globin superfamily are a classical model system to investigate gene evolution and their fates as well as the diversity of protein function. One of the best-known globins is myoglobin (Mb), which is mainly expressed in heart muscle and transports oxygen from the sarcolemma to the m...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8480196/ https://www.ncbi.nlm.nih.gov/pubmed/33871590 http://dx.doi.org/10.1093/gbe/evab078 |
_version_ | 1784576420389847040 |
---|---|
author | Helfenrath, Kathrin Sauer, Markus Kamga, Michelle Wisniewsky, Michelle Burmester, Thorsten Fabrizius, Andrej |
author_facet | Helfenrath, Kathrin Sauer, Markus Kamga, Michelle Wisniewsky, Michelle Burmester, Thorsten Fabrizius, Andrej |
author_sort | Helfenrath, Kathrin |
collection | PubMed |
description | The members of the globin superfamily are a classical model system to investigate gene evolution and their fates as well as the diversity of protein function. One of the best-known globins is myoglobin (Mb), which is mainly expressed in heart muscle and transports oxygen from the sarcolemma to the mitochondria. Most vertebrates harbor a single copy of the myoglobin gene, but some fish species have multiple myoglobin genes. Phylogenetic analyses indicate an independent emergence of multiple myoglobin genes, whereby the origin is mostly the last common ancestor of each order. By analyzing different transcriptome data sets, we found at least 15 multiple myoglobin genes in the polypterid gray bichir (Polypterus senegalus) and reedfish (Erpetoichthys calabaricus). In reedfish, the myoglobin genes are expressed in a broad range of tissues but show very different expression values. In contrast, the Mb genes of the gray bichir show a rather scattered expression pattern; only a few Mb genes were found expressed in the analyzed tissues. Both, gray bichir and reedfish possess lungs which enable them to inhabit shallow and swampy waters throughout tropical Africa with frequently fluctuating and low oxygen concentrations. The myoglobin repertoire probably reflects the molecular adaptation to these conditions. The sequence divergence, the substitution rate, and the different expression pattern of multiple myoglobin genes in gray bichir and reedfish imply different functions, probably through sub- and neofunctionalization during evolution. |
format | Online Article Text |
id | pubmed-8480196 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-84801962021-09-30 The More, the Merrier? Multiple Myoglobin Genes in Fish Species, Especially in Gray Bichir (Polypterus senegalus) and Reedfish (Erpetoichthys calabaricus) Helfenrath, Kathrin Sauer, Markus Kamga, Michelle Wisniewsky, Michelle Burmester, Thorsten Fabrizius, Andrej Genome Biol Evol Research Article The members of the globin superfamily are a classical model system to investigate gene evolution and their fates as well as the diversity of protein function. One of the best-known globins is myoglobin (Mb), which is mainly expressed in heart muscle and transports oxygen from the sarcolemma to the mitochondria. Most vertebrates harbor a single copy of the myoglobin gene, but some fish species have multiple myoglobin genes. Phylogenetic analyses indicate an independent emergence of multiple myoglobin genes, whereby the origin is mostly the last common ancestor of each order. By analyzing different transcriptome data sets, we found at least 15 multiple myoglobin genes in the polypterid gray bichir (Polypterus senegalus) and reedfish (Erpetoichthys calabaricus). In reedfish, the myoglobin genes are expressed in a broad range of tissues but show very different expression values. In contrast, the Mb genes of the gray bichir show a rather scattered expression pattern; only a few Mb genes were found expressed in the analyzed tissues. Both, gray bichir and reedfish possess lungs which enable them to inhabit shallow and swampy waters throughout tropical Africa with frequently fluctuating and low oxygen concentrations. The myoglobin repertoire probably reflects the molecular adaptation to these conditions. The sequence divergence, the substitution rate, and the different expression pattern of multiple myoglobin genes in gray bichir and reedfish imply different functions, probably through sub- and neofunctionalization during evolution. Oxford University Press 2021-04-19 /pmc/articles/PMC8480196/ /pubmed/33871590 http://dx.doi.org/10.1093/gbe/evab078 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Helfenrath, Kathrin Sauer, Markus Kamga, Michelle Wisniewsky, Michelle Burmester, Thorsten Fabrizius, Andrej The More, the Merrier? Multiple Myoglobin Genes in Fish Species, Especially in Gray Bichir (Polypterus senegalus) and Reedfish (Erpetoichthys calabaricus) |
title | The More, the Merrier? Multiple Myoglobin Genes in Fish Species,
Especially in Gray Bichir (Polypterus senegalus) and Reedfish
(Erpetoichthys calabaricus) |
title_full | The More, the Merrier? Multiple Myoglobin Genes in Fish Species,
Especially in Gray Bichir (Polypterus senegalus) and Reedfish
(Erpetoichthys calabaricus) |
title_fullStr | The More, the Merrier? Multiple Myoglobin Genes in Fish Species,
Especially in Gray Bichir (Polypterus senegalus) and Reedfish
(Erpetoichthys calabaricus) |
title_full_unstemmed | The More, the Merrier? Multiple Myoglobin Genes in Fish Species,
Especially in Gray Bichir (Polypterus senegalus) and Reedfish
(Erpetoichthys calabaricus) |
title_short | The More, the Merrier? Multiple Myoglobin Genes in Fish Species,
Especially in Gray Bichir (Polypterus senegalus) and Reedfish
(Erpetoichthys calabaricus) |
title_sort | more, the merrier? multiple myoglobin genes in fish species,
especially in gray bichir (polypterus senegalus) and reedfish
(erpetoichthys calabaricus) |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8480196/ https://www.ncbi.nlm.nih.gov/pubmed/33871590 http://dx.doi.org/10.1093/gbe/evab078 |
work_keys_str_mv | AT helfenrathkathrin themorethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus AT sauermarkus themorethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus AT kamgamichelle themorethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus AT wisniewskymichelle themorethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus AT burmesterthorsten themorethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus AT fabriziusandrej themorethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus AT helfenrathkathrin morethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus AT sauermarkus morethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus AT kamgamichelle morethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus AT wisniewskymichelle morethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus AT burmesterthorsten morethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus AT fabriziusandrej morethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus |