Cargando…

The More, the Merrier? Multiple Myoglobin Genes in Fish Species, Especially in Gray Bichir (Polypterus senegalus) and Reedfish (Erpetoichthys calabaricus)

The members of the globin superfamily are a classical model system to investigate gene evolution and their fates as well as the diversity of protein function. One of the best-known globins is myoglobin (Mb), which is mainly expressed in heart muscle and transports oxygen from the sarcolemma to the m...

Descripción completa

Detalles Bibliográficos
Autores principales: Helfenrath, Kathrin, Sauer, Markus, Kamga, Michelle, Wisniewsky, Michelle, Burmester, Thorsten, Fabrizius, Andrej
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8480196/
https://www.ncbi.nlm.nih.gov/pubmed/33871590
http://dx.doi.org/10.1093/gbe/evab078
_version_ 1784576420389847040
author Helfenrath, Kathrin
Sauer, Markus
Kamga, Michelle
Wisniewsky, Michelle
Burmester, Thorsten
Fabrizius, Andrej
author_facet Helfenrath, Kathrin
Sauer, Markus
Kamga, Michelle
Wisniewsky, Michelle
Burmester, Thorsten
Fabrizius, Andrej
author_sort Helfenrath, Kathrin
collection PubMed
description The members of the globin superfamily are a classical model system to investigate gene evolution and their fates as well as the diversity of protein function. One of the best-known globins is myoglobin (Mb), which is mainly expressed in heart muscle and transports oxygen from the sarcolemma to the mitochondria. Most vertebrates harbor a single copy of the myoglobin gene, but some fish species have multiple myoglobin genes. Phylogenetic analyses indicate an independent emergence of multiple myoglobin genes, whereby the origin is mostly the last common ancestor of each order. By analyzing different transcriptome data sets, we found at least 15 multiple myoglobin genes in the polypterid gray bichir (Polypterus senegalus) and reedfish (Erpetoichthys calabaricus). In reedfish, the myoglobin genes are expressed in a broad range of tissues but show very different expression values. In contrast, the Mb genes of the gray bichir show a rather scattered expression pattern; only a few Mb genes were found expressed in the analyzed tissues. Both, gray bichir and reedfish possess lungs which enable them to inhabit shallow and swampy waters throughout tropical Africa with frequently fluctuating and low oxygen concentrations. The myoglobin repertoire probably reflects the molecular adaptation to these conditions. The sequence divergence, the substitution rate, and the different expression pattern of multiple myoglobin genes in gray bichir and reedfish imply different functions, probably through sub- and neofunctionalization during evolution.
format Online
Article
Text
id pubmed-8480196
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-84801962021-09-30 The More, the Merrier? Multiple Myoglobin Genes in Fish Species, Especially in Gray Bichir (Polypterus senegalus) and Reedfish (Erpetoichthys calabaricus) Helfenrath, Kathrin Sauer, Markus Kamga, Michelle Wisniewsky, Michelle Burmester, Thorsten Fabrizius, Andrej Genome Biol Evol Research Article The members of the globin superfamily are a classical model system to investigate gene evolution and their fates as well as the diversity of protein function. One of the best-known globins is myoglobin (Mb), which is mainly expressed in heart muscle and transports oxygen from the sarcolemma to the mitochondria. Most vertebrates harbor a single copy of the myoglobin gene, but some fish species have multiple myoglobin genes. Phylogenetic analyses indicate an independent emergence of multiple myoglobin genes, whereby the origin is mostly the last common ancestor of each order. By analyzing different transcriptome data sets, we found at least 15 multiple myoglobin genes in the polypterid gray bichir (Polypterus senegalus) and reedfish (Erpetoichthys calabaricus). In reedfish, the myoglobin genes are expressed in a broad range of tissues but show very different expression values. In contrast, the Mb genes of the gray bichir show a rather scattered expression pattern; only a few Mb genes were found expressed in the analyzed tissues. Both, gray bichir and reedfish possess lungs which enable them to inhabit shallow and swampy waters throughout tropical Africa with frequently fluctuating and low oxygen concentrations. The myoglobin repertoire probably reflects the molecular adaptation to these conditions. The sequence divergence, the substitution rate, and the different expression pattern of multiple myoglobin genes in gray bichir and reedfish imply different functions, probably through sub- and neofunctionalization during evolution. Oxford University Press 2021-04-19 /pmc/articles/PMC8480196/ /pubmed/33871590 http://dx.doi.org/10.1093/gbe/evab078 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Helfenrath, Kathrin
Sauer, Markus
Kamga, Michelle
Wisniewsky, Michelle
Burmester, Thorsten
Fabrizius, Andrej
The More, the Merrier? Multiple Myoglobin Genes in Fish Species, Especially in Gray Bichir (Polypterus senegalus) and Reedfish (Erpetoichthys calabaricus)
title The More, the Merrier? Multiple Myoglobin Genes in Fish Species, Especially in Gray Bichir (Polypterus senegalus) and Reedfish (Erpetoichthys calabaricus)
title_full The More, the Merrier? Multiple Myoglobin Genes in Fish Species, Especially in Gray Bichir (Polypterus senegalus) and Reedfish (Erpetoichthys calabaricus)
title_fullStr The More, the Merrier? Multiple Myoglobin Genes in Fish Species, Especially in Gray Bichir (Polypterus senegalus) and Reedfish (Erpetoichthys calabaricus)
title_full_unstemmed The More, the Merrier? Multiple Myoglobin Genes in Fish Species, Especially in Gray Bichir (Polypterus senegalus) and Reedfish (Erpetoichthys calabaricus)
title_short The More, the Merrier? Multiple Myoglobin Genes in Fish Species, Especially in Gray Bichir (Polypterus senegalus) and Reedfish (Erpetoichthys calabaricus)
title_sort more, the merrier? multiple myoglobin genes in fish species, especially in gray bichir (polypterus senegalus) and reedfish (erpetoichthys calabaricus)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8480196/
https://www.ncbi.nlm.nih.gov/pubmed/33871590
http://dx.doi.org/10.1093/gbe/evab078
work_keys_str_mv AT helfenrathkathrin themorethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus
AT sauermarkus themorethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus
AT kamgamichelle themorethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus
AT wisniewskymichelle themorethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus
AT burmesterthorsten themorethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus
AT fabriziusandrej themorethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus
AT helfenrathkathrin morethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus
AT sauermarkus morethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus
AT kamgamichelle morethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus
AT wisniewskymichelle morethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus
AT burmesterthorsten morethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus
AT fabriziusandrej morethemerriermultiplemyoglobingenesinfishspeciesespeciallyingraybichirpolypterussenegalusandreedfisherpetoichthyscalabaricus