Cargando…
A Mating Procedure for Genetic Transfer of Integrative and Conjugative Elements (ICEs) of Streptococci and Enterococci
DNA sequencing of whole bacterial genomes has revealed that the entire set of mobile genes (mobilome) represents as much as 25% of the bacterial genome. Despite the huge availability of sequence data, the functional analysis of the mobile genetic elements (MGEs) is rarely reported. Therefore, establ...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8482134/ https://www.ncbi.nlm.nih.gov/pubmed/34564305 http://dx.doi.org/10.3390/mps4030059 |
_version_ | 1784576834045739008 |
---|---|
author | Iannelli, Francesco Santoro, Francesco Fox, Valeria Pozzi, Gianni |
author_facet | Iannelli, Francesco Santoro, Francesco Fox, Valeria Pozzi, Gianni |
author_sort | Iannelli, Francesco |
collection | PubMed |
description | DNA sequencing of whole bacterial genomes has revealed that the entire set of mobile genes (mobilome) represents as much as 25% of the bacterial genome. Despite the huge availability of sequence data, the functional analysis of the mobile genetic elements (MGEs) is rarely reported. Therefore, established laboratory protocols are needed to investigate the biology of this important part of the bacterial genome. Conjugation is a mechanism of horizontal gene transfer which allows the exchange of MGEs among strains of the same or different bacterial species. In streptococci and enterococci, integrative and conjugative elements (ICEs) represent a large part of the mobilome. Here, we describe an efficient and easy-to-perform plate mating protocol for in vitro conjugative transfer of ICEs in streptococci (Streptococcus pneumoniae, Streptococcus agalactiae, Streptococcus gordonii, Streptococcus pyogenes), Enterococcus faecalis, and Bacillus subtilis. Conjugative transfer is carried out on solid media and selection of transconjugants is performed with a multilayer plating. This protocol allows the transfer of large genetic elements with a size up to 81 kb, and a transfer frequency up to 6.7 × 10(−3) transconjugants/donor cells. |
format | Online Article Text |
id | pubmed-8482134 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-84821342021-10-01 A Mating Procedure for Genetic Transfer of Integrative and Conjugative Elements (ICEs) of Streptococci and Enterococci Iannelli, Francesco Santoro, Francesco Fox, Valeria Pozzi, Gianni Methods Protoc Protocol DNA sequencing of whole bacterial genomes has revealed that the entire set of mobile genes (mobilome) represents as much as 25% of the bacterial genome. Despite the huge availability of sequence data, the functional analysis of the mobile genetic elements (MGEs) is rarely reported. Therefore, established laboratory protocols are needed to investigate the biology of this important part of the bacterial genome. Conjugation is a mechanism of horizontal gene transfer which allows the exchange of MGEs among strains of the same or different bacterial species. In streptococci and enterococci, integrative and conjugative elements (ICEs) represent a large part of the mobilome. Here, we describe an efficient and easy-to-perform plate mating protocol for in vitro conjugative transfer of ICEs in streptococci (Streptococcus pneumoniae, Streptococcus agalactiae, Streptococcus gordonii, Streptococcus pyogenes), Enterococcus faecalis, and Bacillus subtilis. Conjugative transfer is carried out on solid media and selection of transconjugants is performed with a multilayer plating. This protocol allows the transfer of large genetic elements with a size up to 81 kb, and a transfer frequency up to 6.7 × 10(−3) transconjugants/donor cells. MDPI 2021-08-28 /pmc/articles/PMC8482134/ /pubmed/34564305 http://dx.doi.org/10.3390/mps4030059 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Protocol Iannelli, Francesco Santoro, Francesco Fox, Valeria Pozzi, Gianni A Mating Procedure for Genetic Transfer of Integrative and Conjugative Elements (ICEs) of Streptococci and Enterococci |
title | A Mating Procedure for Genetic Transfer of Integrative and Conjugative Elements (ICEs) of Streptococci and Enterococci |
title_full | A Mating Procedure for Genetic Transfer of Integrative and Conjugative Elements (ICEs) of Streptococci and Enterococci |
title_fullStr | A Mating Procedure for Genetic Transfer of Integrative and Conjugative Elements (ICEs) of Streptococci and Enterococci |
title_full_unstemmed | A Mating Procedure for Genetic Transfer of Integrative and Conjugative Elements (ICEs) of Streptococci and Enterococci |
title_short | A Mating Procedure for Genetic Transfer of Integrative and Conjugative Elements (ICEs) of Streptococci and Enterococci |
title_sort | mating procedure for genetic transfer of integrative and conjugative elements (ices) of streptococci and enterococci |
topic | Protocol |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8482134/ https://www.ncbi.nlm.nih.gov/pubmed/34564305 http://dx.doi.org/10.3390/mps4030059 |
work_keys_str_mv | AT iannellifrancesco amatingprocedureforgenetictransferofintegrativeandconjugativeelementsicesofstreptococciandenterococci AT santorofrancesco amatingprocedureforgenetictransferofintegrativeandconjugativeelementsicesofstreptococciandenterococci AT foxvaleria amatingprocedureforgenetictransferofintegrativeandconjugativeelementsicesofstreptococciandenterococci AT pozzigianni amatingprocedureforgenetictransferofintegrativeandconjugativeelementsicesofstreptococciandenterococci AT iannellifrancesco matingprocedureforgenetictransferofintegrativeandconjugativeelementsicesofstreptococciandenterococci AT santorofrancesco matingprocedureforgenetictransferofintegrativeandconjugativeelementsicesofstreptococciandenterococci AT foxvaleria matingprocedureforgenetictransferofintegrativeandconjugativeelementsicesofstreptococciandenterococci AT pozzigianni matingprocedureforgenetictransferofintegrativeandconjugativeelementsicesofstreptococciandenterococci |