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Registration-free analysis of diffusion MRI tractography data across subjects through the human lifespan

Diffusion MRI tractography produces massive sets of streamlines that need to be clustered into anatomically meaningful white-matter bundles. Conventional clustering techniques group streamlines based on their proximity in Euclidean space. We have developed AnatomiCuts, an unsupervised method for clu...

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Autores principales: Siless, Viviana, Davidow, Juliet Y., Nielsen, Jared, Fan, Qiuyun, Hedden, Trey, Hollinshead, Marisa, Beam, Elizabeth, Vidal Bustamante, Constanza M., Garrad, Megan C., Santillana, Rosario, Smith, Emily E., Hamadeh, Aya, Snyder, Jenna, Drews, Michelle K., Van Dijk, Koene R.A., Sheridan, Margaret, Somerville, Leah H., Yendiki, Anastasia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8482444/
https://www.ncbi.nlm.nih.gov/pubmed/32151759
http://dx.doi.org/10.1016/j.neuroimage.2020.116703
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author Siless, Viviana
Davidow, Juliet Y.
Nielsen, Jared
Fan, Qiuyun
Hedden, Trey
Hollinshead, Marisa
Beam, Elizabeth
Vidal Bustamante, Constanza M.
Garrad, Megan C.
Santillana, Rosario
Smith, Emily E.
Hamadeh, Aya
Snyder, Jenna
Drews, Michelle K.
Van Dijk, Koene R.A.
Sheridan, Margaret
Somerville, Leah H.
Yendiki, Anastasia
author_facet Siless, Viviana
Davidow, Juliet Y.
Nielsen, Jared
Fan, Qiuyun
Hedden, Trey
Hollinshead, Marisa
Beam, Elizabeth
Vidal Bustamante, Constanza M.
Garrad, Megan C.
Santillana, Rosario
Smith, Emily E.
Hamadeh, Aya
Snyder, Jenna
Drews, Michelle K.
Van Dijk, Koene R.A.
Sheridan, Margaret
Somerville, Leah H.
Yendiki, Anastasia
author_sort Siless, Viviana
collection PubMed
description Diffusion MRI tractography produces massive sets of streamlines that need to be clustered into anatomically meaningful white-matter bundles. Conventional clustering techniques group streamlines based on their proximity in Euclidean space. We have developed AnatomiCuts, an unsupervised method for clustering tractography streamlines based on their neighboring anatomical structures, rather than their coordinates in Euclidean space. In this work, we show that the anatomical similarity metric used in AnatomiCuts can be extended to find corresponding clusters across subjects and across hemispheres, without inter-subject or inter-hemispheric registration. Our proposed approach enables group-wise tract cluster analysis, as well as studies of hemispheric asymmetry. We evaluate our approach on data from the pilot MGH-Harvard-USC Lifespan Human Connectome project, showing improved correspondence in tract clusters across 184 subjects aged 8–90. Our method shows up to 38% improvement in the overlap of corresponding clusters when comparing subjects with large age differences. The techniques presented here do not require registration to a template and can thus be applied to populations with large inter-subject variability, e.g., due to brain development, aging, or neurological disorders.
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spelling pubmed-84824442021-09-30 Registration-free analysis of diffusion MRI tractography data across subjects through the human lifespan Siless, Viviana Davidow, Juliet Y. Nielsen, Jared Fan, Qiuyun Hedden, Trey Hollinshead, Marisa Beam, Elizabeth Vidal Bustamante, Constanza M. Garrad, Megan C. Santillana, Rosario Smith, Emily E. Hamadeh, Aya Snyder, Jenna Drews, Michelle K. Van Dijk, Koene R.A. Sheridan, Margaret Somerville, Leah H. Yendiki, Anastasia Neuroimage Article Diffusion MRI tractography produces massive sets of streamlines that need to be clustered into anatomically meaningful white-matter bundles. Conventional clustering techniques group streamlines based on their proximity in Euclidean space. We have developed AnatomiCuts, an unsupervised method for clustering tractography streamlines based on their neighboring anatomical structures, rather than their coordinates in Euclidean space. In this work, we show that the anatomical similarity metric used in AnatomiCuts can be extended to find corresponding clusters across subjects and across hemispheres, without inter-subject or inter-hemispheric registration. Our proposed approach enables group-wise tract cluster analysis, as well as studies of hemispheric asymmetry. We evaluate our approach on data from the pilot MGH-Harvard-USC Lifespan Human Connectome project, showing improved correspondence in tract clusters across 184 subjects aged 8–90. Our method shows up to 38% improvement in the overlap of corresponding clusters when comparing subjects with large age differences. The techniques presented here do not require registration to a template and can thus be applied to populations with large inter-subject variability, e.g., due to brain development, aging, or neurological disorders. 2020-03-06 2020-07-01 /pmc/articles/PMC8482444/ /pubmed/32151759 http://dx.doi.org/10.1016/j.neuroimage.2020.116703 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) ).
spellingShingle Article
Siless, Viviana
Davidow, Juliet Y.
Nielsen, Jared
Fan, Qiuyun
Hedden, Trey
Hollinshead, Marisa
Beam, Elizabeth
Vidal Bustamante, Constanza M.
Garrad, Megan C.
Santillana, Rosario
Smith, Emily E.
Hamadeh, Aya
Snyder, Jenna
Drews, Michelle K.
Van Dijk, Koene R.A.
Sheridan, Margaret
Somerville, Leah H.
Yendiki, Anastasia
Registration-free analysis of diffusion MRI tractography data across subjects through the human lifespan
title Registration-free analysis of diffusion MRI tractography data across subjects through the human lifespan
title_full Registration-free analysis of diffusion MRI tractography data across subjects through the human lifespan
title_fullStr Registration-free analysis of diffusion MRI tractography data across subjects through the human lifespan
title_full_unstemmed Registration-free analysis of diffusion MRI tractography data across subjects through the human lifespan
title_short Registration-free analysis of diffusion MRI tractography data across subjects through the human lifespan
title_sort registration-free analysis of diffusion mri tractography data across subjects through the human lifespan
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8482444/
https://www.ncbi.nlm.nih.gov/pubmed/32151759
http://dx.doi.org/10.1016/j.neuroimage.2020.116703
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