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Pyrrole and Pyridine in the Water Environment—Effect of Discrete and Continuum Solvation Models
[Image: see text] Properties of pyrrole and pyridine molecules upon different hydrations were investigated through density functional theory. Complexes of studied molecules with a cluster of 50 water molecules were considered, and the polarizable continuum model of solvation (PCM) was also taken int...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8482501/ https://www.ncbi.nlm.nih.gov/pubmed/34604651 http://dx.doi.org/10.1021/acsomega.1c03437 |
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author | Zborowski, Krzysztof K. Poater, Jordi |
author_facet | Zborowski, Krzysztof K. Poater, Jordi |
author_sort | Zborowski, Krzysztof K. |
collection | PubMed |
description | [Image: see text] Properties of pyrrole and pyridine molecules upon different hydrations were investigated through density functional theory. Complexes of studied molecules with a cluster of 50 water molecules were considered, and the polarizable continuum model of solvation (PCM) was also taken into account. For comparative purposes, all mentioned calculations were repeated for single pyrrole and pyridine molecules and their complexes with one water molecule. Aromaticities of solvated pyrrole and pyridine rings were studied using several geometric- and electronic-based aromaticity criteria. Special attention was paid to studying the properties of formed hydrogen bonds between pyrrole or pyridine and either a single water molecule or several water molecules of the cluster. Overall, a comprehensive description of two very important heterocyclic compounds, that is, pyrrole and pyridine, in both discrete and continuum water solutions, is extensively presented. |
format | Online Article Text |
id | pubmed-8482501 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-84825012021-10-01 Pyrrole and Pyridine in the Water Environment—Effect of Discrete and Continuum Solvation Models Zborowski, Krzysztof K. Poater, Jordi ACS Omega [Image: see text] Properties of pyrrole and pyridine molecules upon different hydrations were investigated through density functional theory. Complexes of studied molecules with a cluster of 50 water molecules were considered, and the polarizable continuum model of solvation (PCM) was also taken into account. For comparative purposes, all mentioned calculations were repeated for single pyrrole and pyridine molecules and their complexes with one water molecule. Aromaticities of solvated pyrrole and pyridine rings were studied using several geometric- and electronic-based aromaticity criteria. Special attention was paid to studying the properties of formed hydrogen bonds between pyrrole or pyridine and either a single water molecule or several water molecules of the cluster. Overall, a comprehensive description of two very important heterocyclic compounds, that is, pyrrole and pyridine, in both discrete and continuum water solutions, is extensively presented. American Chemical Society 2021-09-14 /pmc/articles/PMC8482501/ /pubmed/34604651 http://dx.doi.org/10.1021/acsomega.1c03437 Text en © 2021 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Zborowski, Krzysztof K. Poater, Jordi Pyrrole and Pyridine in the Water Environment—Effect of Discrete and Continuum Solvation Models |
title | Pyrrole and Pyridine in the Water Environment—Effect
of Discrete and Continuum Solvation Models |
title_full | Pyrrole and Pyridine in the Water Environment—Effect
of Discrete and Continuum Solvation Models |
title_fullStr | Pyrrole and Pyridine in the Water Environment—Effect
of Discrete and Continuum Solvation Models |
title_full_unstemmed | Pyrrole and Pyridine in the Water Environment—Effect
of Discrete and Continuum Solvation Models |
title_short | Pyrrole and Pyridine in the Water Environment—Effect
of Discrete and Continuum Solvation Models |
title_sort | pyrrole and pyridine in the water environment—effect
of discrete and continuum solvation models |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8482501/ https://www.ncbi.nlm.nih.gov/pubmed/34604651 http://dx.doi.org/10.1021/acsomega.1c03437 |
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