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Effect of control measures on the pattern of COVID-19 Epidemics in Japan

BACKGROUND: COVID-19 has spread worldwide since its emergence in 2019. In contrast to many other countries with epidemics, Japan differed in that it avoided lockdowns and instead asked people for self-control. A travel campaign was conducted with a sizable budget, but the number of PCR tests was sev...

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Autor principal: Konishi, Tomokazu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8483016/
https://www.ncbi.nlm.nih.gov/pubmed/34692252
http://dx.doi.org/10.7717/peerj.12215
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author Konishi, Tomokazu
author_facet Konishi, Tomokazu
author_sort Konishi, Tomokazu
collection PubMed
description BACKGROUND: COVID-19 has spread worldwide since its emergence in 2019. In contrast to many other countries with epidemics, Japan differed in that it avoided lockdowns and instead asked people for self-control. A travel campaign was conducted with a sizable budget, but the number of PCR tests was severely limited. These choices may have influenced the course of the epidemic. METHODS: The increase or decrease in the classes of SARS-CoV-2 variants was estimated by analyzing the published sequences with an objective multivariate analysis. This approach observes the samples in multiple directions, digesting complex differences into simpler forms. The results were compared over time with the number of confirmed cases, PCR tests, and overseas visitors. The kinetics of infection were analyzed using the logarithmic growth rate. RESULTS: The declared states of emergency failed to alter the movement of the growth rate. Three epidemic peaks were caused by domestically mutated variants. In other countries, there are few cases in which multiple variants have peaked. However, due to the relaxation of immigration restrictions, several infective variants have been imported from abroad and are currently competing for expansion, creating the fourth peak. By April 2021, these foreign variants exceeded 80%. The chaotic situation in Japan will continue for some time, in part because no effort has been made to identify asymptomatic carriers, and details of the vaccination program are undecided.
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spelling pubmed-84830162021-10-22 Effect of control measures on the pattern of COVID-19 Epidemics in Japan Konishi, Tomokazu PeerJ Bioinformatics BACKGROUND: COVID-19 has spread worldwide since its emergence in 2019. In contrast to many other countries with epidemics, Japan differed in that it avoided lockdowns and instead asked people for self-control. A travel campaign was conducted with a sizable budget, but the number of PCR tests was severely limited. These choices may have influenced the course of the epidemic. METHODS: The increase or decrease in the classes of SARS-CoV-2 variants was estimated by analyzing the published sequences with an objective multivariate analysis. This approach observes the samples in multiple directions, digesting complex differences into simpler forms. The results were compared over time with the number of confirmed cases, PCR tests, and overseas visitors. The kinetics of infection were analyzed using the logarithmic growth rate. RESULTS: The declared states of emergency failed to alter the movement of the growth rate. Three epidemic peaks were caused by domestically mutated variants. In other countries, there are few cases in which multiple variants have peaked. However, due to the relaxation of immigration restrictions, several infective variants have been imported from abroad and are currently competing for expansion, creating the fourth peak. By April 2021, these foreign variants exceeded 80%. The chaotic situation in Japan will continue for some time, in part because no effort has been made to identify asymptomatic carriers, and details of the vaccination program are undecided. PeerJ Inc. 2021-09-27 /pmc/articles/PMC8483016/ /pubmed/34692252 http://dx.doi.org/10.7717/peerj.12215 Text en © 2021 Konishi https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Konishi, Tomokazu
Effect of control measures on the pattern of COVID-19 Epidemics in Japan
title Effect of control measures on the pattern of COVID-19 Epidemics in Japan
title_full Effect of control measures on the pattern of COVID-19 Epidemics in Japan
title_fullStr Effect of control measures on the pattern of COVID-19 Epidemics in Japan
title_full_unstemmed Effect of control measures on the pattern of COVID-19 Epidemics in Japan
title_short Effect of control measures on the pattern of COVID-19 Epidemics in Japan
title_sort effect of control measures on the pattern of covid-19 epidemics in japan
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8483016/
https://www.ncbi.nlm.nih.gov/pubmed/34692252
http://dx.doi.org/10.7717/peerj.12215
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