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VCAM1 expression in the myocardium is associated with the risk of heart failure and immune cell infiltration in myocardium
Ischemic heart disease (IHD) and dilated cardiomyopathy (DCM) are the two most common etiologies of heart failure (HF). Both forms share common characteristics including ventricle dilation in the final stage. Immune mechanisms in HF are increasingly highlighted and have been implicated in the pathog...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8484263/ https://www.ncbi.nlm.nih.gov/pubmed/34593936 http://dx.doi.org/10.1038/s41598-021-98998-3 |
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author | Wang, Tongyu Tian, Jiahu Jin, Yuanzhe |
author_facet | Wang, Tongyu Tian, Jiahu Jin, Yuanzhe |
author_sort | Wang, Tongyu |
collection | PubMed |
description | Ischemic heart disease (IHD) and dilated cardiomyopathy (DCM) are the two most common etiologies of heart failure (HF). Both forms share common characteristics including ventricle dilation in the final stage. Immune mechanisms in HF are increasingly highlighted and have been implicated in the pathogeneses of IHD and DCM. A better understanding of adhesion molecule expression and correlated immune cell infiltration could enhance disease detection and improve therapeutic targets. This study was performed to explore the common mechanisms underlying IHD and DCM. After searching the Gene Expression Omnibus database, we selected the GSE42955, GSE76701, GSE5406, GSE133054 and GSE57338 datasets for different expressed gene (DEGs) selection and new cohort establishment. We use xcell to calculate immune infiltration degree, ssGSEA and GSEA to calculate the pathway and biological enrichment score, consensus cluster to identify the m6A modification pattern, and LASSO regression to make risk predicting model and use new combined cohort to validate the results. The screening stage revealed that vascular cell adhesion molecule 1 (VCAM1) play pivotal roles in regulating DEGs. Subsequent analyses revealed that VCAM1 was differentially expressed in the myocardium and involved in regulating immune cell infiltration. We also found that dysregulated VCAM1 expression was associated with a higher risk of HF by constructing a clinical risk-predicting model. Besides, we also find a connection among the m6A RNA modification ,expression of VCAM1 and immune regulation. Those connection can be linked by the Wnt pathway enrichment alternation. Collectively, our results suggest that VCAM-1 have the potential to be used as a biomarker or therapy target for HF and the m6A modification pattern is associated with the VCAM1 expression and immune regulation. |
format | Online Article Text |
id | pubmed-8484263 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-84842632021-10-01 VCAM1 expression in the myocardium is associated with the risk of heart failure and immune cell infiltration in myocardium Wang, Tongyu Tian, Jiahu Jin, Yuanzhe Sci Rep Article Ischemic heart disease (IHD) and dilated cardiomyopathy (DCM) are the two most common etiologies of heart failure (HF). Both forms share common characteristics including ventricle dilation in the final stage. Immune mechanisms in HF are increasingly highlighted and have been implicated in the pathogeneses of IHD and DCM. A better understanding of adhesion molecule expression and correlated immune cell infiltration could enhance disease detection and improve therapeutic targets. This study was performed to explore the common mechanisms underlying IHD and DCM. After searching the Gene Expression Omnibus database, we selected the GSE42955, GSE76701, GSE5406, GSE133054 and GSE57338 datasets for different expressed gene (DEGs) selection and new cohort establishment. We use xcell to calculate immune infiltration degree, ssGSEA and GSEA to calculate the pathway and biological enrichment score, consensus cluster to identify the m6A modification pattern, and LASSO regression to make risk predicting model and use new combined cohort to validate the results. The screening stage revealed that vascular cell adhesion molecule 1 (VCAM1) play pivotal roles in regulating DEGs. Subsequent analyses revealed that VCAM1 was differentially expressed in the myocardium and involved in regulating immune cell infiltration. We also found that dysregulated VCAM1 expression was associated with a higher risk of HF by constructing a clinical risk-predicting model. Besides, we also find a connection among the m6A RNA modification ,expression of VCAM1 and immune regulation. Those connection can be linked by the Wnt pathway enrichment alternation. Collectively, our results suggest that VCAM-1 have the potential to be used as a biomarker or therapy target for HF and the m6A modification pattern is associated with the VCAM1 expression and immune regulation. Nature Publishing Group UK 2021-09-30 /pmc/articles/PMC8484263/ /pubmed/34593936 http://dx.doi.org/10.1038/s41598-021-98998-3 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Wang, Tongyu Tian, Jiahu Jin, Yuanzhe VCAM1 expression in the myocardium is associated with the risk of heart failure and immune cell infiltration in myocardium |
title | VCAM1 expression in the myocardium is associated with the risk of heart failure and immune cell infiltration in myocardium |
title_full | VCAM1 expression in the myocardium is associated with the risk of heart failure and immune cell infiltration in myocardium |
title_fullStr | VCAM1 expression in the myocardium is associated with the risk of heart failure and immune cell infiltration in myocardium |
title_full_unstemmed | VCAM1 expression in the myocardium is associated with the risk of heart failure and immune cell infiltration in myocardium |
title_short | VCAM1 expression in the myocardium is associated with the risk of heart failure and immune cell infiltration in myocardium |
title_sort | vcam1 expression in the myocardium is associated with the risk of heart failure and immune cell infiltration in myocardium |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8484263/ https://www.ncbi.nlm.nih.gov/pubmed/34593936 http://dx.doi.org/10.1038/s41598-021-98998-3 |
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