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Multi-Task Deep Supervision on Attention R2U-Net for Brain Tumor Segmentation
Accurate automatic medical image segmentation technology plays an important role for the diagnosis and treatment of brain tumor. However, simple deep learning models are difficult to locate the tumor area and obtain accurate segmentation boundaries. In order to solve the problems above, we propose a...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8484917/ https://www.ncbi.nlm.nih.gov/pubmed/34604039 http://dx.doi.org/10.3389/fonc.2021.704850 |
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author | Ma, Shiqiang Tang, Jijun Guo, Fei |
author_facet | Ma, Shiqiang Tang, Jijun Guo, Fei |
author_sort | Ma, Shiqiang |
collection | PubMed |
description | Accurate automatic medical image segmentation technology plays an important role for the diagnosis and treatment of brain tumor. However, simple deep learning models are difficult to locate the tumor area and obtain accurate segmentation boundaries. In order to solve the problems above, we propose a 2D end-to-end model of attention R2U-Net with multi-task deep supervision (MTDS). MTDS can extract rich semantic information from images, obtain accurate segmentation boundaries, and prevent overfitting problems in deep learning. Furthermore, we propose the attention pre-activation residual module (APR), which is an attention mechanism based on multi-scale fusion methods. APR is suitable for a deep learning model to help the network locate the tumor area accurately. Finally, we evaluate our proposed model on the public BraTS 2020 validation dataset which consists of 125 cases, and got a competitive brain tumor segmentation result. Compared with the state-of-the-art brain tumor segmentation methods, our method has the characteristics of a small parameter and low computational cost. |
format | Online Article Text |
id | pubmed-8484917 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-84849172021-10-02 Multi-Task Deep Supervision on Attention R2U-Net for Brain Tumor Segmentation Ma, Shiqiang Tang, Jijun Guo, Fei Front Oncol Oncology Accurate automatic medical image segmentation technology plays an important role for the diagnosis and treatment of brain tumor. However, simple deep learning models are difficult to locate the tumor area and obtain accurate segmentation boundaries. In order to solve the problems above, we propose a 2D end-to-end model of attention R2U-Net with multi-task deep supervision (MTDS). MTDS can extract rich semantic information from images, obtain accurate segmentation boundaries, and prevent overfitting problems in deep learning. Furthermore, we propose the attention pre-activation residual module (APR), which is an attention mechanism based on multi-scale fusion methods. APR is suitable for a deep learning model to help the network locate the tumor area accurately. Finally, we evaluate our proposed model on the public BraTS 2020 validation dataset which consists of 125 cases, and got a competitive brain tumor segmentation result. Compared with the state-of-the-art brain tumor segmentation methods, our method has the characteristics of a small parameter and low computational cost. Frontiers Media S.A. 2021-09-17 /pmc/articles/PMC8484917/ /pubmed/34604039 http://dx.doi.org/10.3389/fonc.2021.704850 Text en Copyright © 2021 Ma, Tang and Guo https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Ma, Shiqiang Tang, Jijun Guo, Fei Multi-Task Deep Supervision on Attention R2U-Net for Brain Tumor Segmentation |
title | Multi-Task Deep Supervision on Attention R2U-Net for Brain Tumor Segmentation |
title_full | Multi-Task Deep Supervision on Attention R2U-Net for Brain Tumor Segmentation |
title_fullStr | Multi-Task Deep Supervision on Attention R2U-Net for Brain Tumor Segmentation |
title_full_unstemmed | Multi-Task Deep Supervision on Attention R2U-Net for Brain Tumor Segmentation |
title_short | Multi-Task Deep Supervision on Attention R2U-Net for Brain Tumor Segmentation |
title_sort | multi-task deep supervision on attention r2u-net for brain tumor segmentation |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8484917/ https://www.ncbi.nlm.nih.gov/pubmed/34604039 http://dx.doi.org/10.3389/fonc.2021.704850 |
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