Cargando…

Data on RNA-seq analysis of Drosophila melanogaster during ageing

Ageing is defined as gradual decline of physiological, cellular and molecular state of an organism with time. The age-associated cell dysfunctions usually cause chronic diseases such as diabetes, cancers and other age-related diseases. Many of the genes and pathways involved in ageing are conserved...

Descripción completa

Detalles Bibliográficos
Autores principales: Bajgiran, Morteza, Azlan, Azali, Shamsuddin, Shaharum, Azzam, Ghows, Halim, Mardani Abdul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8488473/
https://www.ncbi.nlm.nih.gov/pubmed/34632013
http://dx.doi.org/10.1016/j.dib.2021.107413
_version_ 1784578176315293696
author Bajgiran, Morteza
Azlan, Azali
Shamsuddin, Shaharum
Azzam, Ghows
Halim, Mardani Abdul
author_facet Bajgiran, Morteza
Azlan, Azali
Shamsuddin, Shaharum
Azzam, Ghows
Halim, Mardani Abdul
author_sort Bajgiran, Morteza
collection PubMed
description Ageing is defined as gradual decline of physiological, cellular and molecular state of an organism with time. The age-associated cell dysfunctions usually cause chronic diseases such as diabetes, cancers and other age-related diseases. Many of the genes and pathways involved in ageing are conserved in different species. These genes and pathways have been categorised into nine cellular and molecular hallmarks, namely, genomic instability, telomere attrition, loss of proteostasis, mitochondrial dysfunction, epigenetic alterations, deregulated nutrient sensing, stem cell exhaustion, cellular senescence and altered intercellular communication. Despite countless studies on ageing, the molecular mechanism of ageing is poorly understood. Here, we performed genome wide transcriptome mapping of ageing process in D. melanogaster. In which, transcriptomic analysis conducted on the 1 day and 60 days flies. Illumina Hiseq platform were used to generate raw data. Afterwards, further analysis including differential expression analysis, GO classification and KEGG pathway enrichment analysis were performed. The raw data were uploaded to SRA database and the BioProject ID is PRJNA718442. These data provide the basis for future research in order to discover the genes and pathways involved in ageing.
format Online
Article
Text
id pubmed-8488473
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-84884732021-10-08 Data on RNA-seq analysis of Drosophila melanogaster during ageing Bajgiran, Morteza Azlan, Azali Shamsuddin, Shaharum Azzam, Ghows Halim, Mardani Abdul Data Brief Data Article Ageing is defined as gradual decline of physiological, cellular and molecular state of an organism with time. The age-associated cell dysfunctions usually cause chronic diseases such as diabetes, cancers and other age-related diseases. Many of the genes and pathways involved in ageing are conserved in different species. These genes and pathways have been categorised into nine cellular and molecular hallmarks, namely, genomic instability, telomere attrition, loss of proteostasis, mitochondrial dysfunction, epigenetic alterations, deregulated nutrient sensing, stem cell exhaustion, cellular senescence and altered intercellular communication. Despite countless studies on ageing, the molecular mechanism of ageing is poorly understood. Here, we performed genome wide transcriptome mapping of ageing process in D. melanogaster. In which, transcriptomic analysis conducted on the 1 day and 60 days flies. Illumina Hiseq platform were used to generate raw data. Afterwards, further analysis including differential expression analysis, GO classification and KEGG pathway enrichment analysis were performed. The raw data were uploaded to SRA database and the BioProject ID is PRJNA718442. These data provide the basis for future research in order to discover the genes and pathways involved in ageing. Elsevier 2021-09-22 /pmc/articles/PMC8488473/ /pubmed/34632013 http://dx.doi.org/10.1016/j.dib.2021.107413 Text en © 2021 Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Bajgiran, Morteza
Azlan, Azali
Shamsuddin, Shaharum
Azzam, Ghows
Halim, Mardani Abdul
Data on RNA-seq analysis of Drosophila melanogaster during ageing
title Data on RNA-seq analysis of Drosophila melanogaster during ageing
title_full Data on RNA-seq analysis of Drosophila melanogaster during ageing
title_fullStr Data on RNA-seq analysis of Drosophila melanogaster during ageing
title_full_unstemmed Data on RNA-seq analysis of Drosophila melanogaster during ageing
title_short Data on RNA-seq analysis of Drosophila melanogaster during ageing
title_sort data on rna-seq analysis of drosophila melanogaster during ageing
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8488473/
https://www.ncbi.nlm.nih.gov/pubmed/34632013
http://dx.doi.org/10.1016/j.dib.2021.107413
work_keys_str_mv AT bajgiranmorteza dataonrnaseqanalysisofdrosophilamelanogasterduringageing
AT azlanazali dataonrnaseqanalysisofdrosophilamelanogasterduringageing
AT shamsuddinshaharum dataonrnaseqanalysisofdrosophilamelanogasterduringageing
AT azzamghows dataonrnaseqanalysisofdrosophilamelanogasterduringageing
AT halimmardaniabdul dataonrnaseqanalysisofdrosophilamelanogasterduringageing