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Machine deep learning accurately detects endoleak after endovascular abdominal aortic aneurysm repair

OBJECTIVE: The objective of this study was to develop a machine deep learning algorithm for endoleak detection and measurement of aneurysm diameter, area, and volume from computed tomography angiography (CTA). METHODS: Digital Imaging and Communications in Medicine files representing three-phase pos...

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Autores principales: Hahn, Sage, Perry, Mark, Morris, Christopher S., Wshah, Safwan, Bertges, Daniel J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8489204/
https://www.ncbi.nlm.nih.gov/pubmed/34617036
http://dx.doi.org/10.1016/j.jvssci.2019.12.003
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author Hahn, Sage
Perry, Mark
Morris, Christopher S.
Wshah, Safwan
Bertges, Daniel J.
author_facet Hahn, Sage
Perry, Mark
Morris, Christopher S.
Wshah, Safwan
Bertges, Daniel J.
author_sort Hahn, Sage
collection PubMed
description OBJECTIVE: The objective of this study was to develop a machine deep learning algorithm for endoleak detection and measurement of aneurysm diameter, area, and volume from computed tomography angiography (CTA). METHODS: Digital Imaging and Communications in Medicine files representing three-phase postoperative CTA images (N = 334) of 191 unique patients undergoing endovascular aneurysm repair for infrarenal abdominal aortic aneurysm (AAA) with a variety of commercial devices were used to train a deep learning pipeline across four tasks. The RetinaNet object-detection convolutional neural network (CNN) architecture was trained to predict bounding boxes around the axial CTA slices that were then stitched together in two dimensions into a smaller region containing the aneurysm. Multiclass endoleak detection and segmentation of the AAA, endograft, and endoleak were performed on this smaller region. Segmentations on a single randomly selected contrast from each scan included 33 full and 68 partial segmentations for endograft and AAA and 99 full segmentations for endoleak. A modified version of ResNet-50 CNN was used to detect endoleak on individual axial slices. A three-dimensional U-Net CNN model was trained on the task of dense three-dimensional segmentation and used to measure diameter and volume with a specially designed loss function. We made use of fivefold cross-validation to evaluate model performance for each step, splitting training and testing data at each fold, such that multiple scans from the same patient were preserved with the same fold. Algorithm predictions for endoleak were compared with the radiology report and with a subset of CTA images independently read by two vascular specialists. RESULTS: The localization portion of the network accurately predicted a region of interest containing the AAA in 99% of cases. The best model of binary endoleak detection obtained an area under the receiver operating characteristic curve of 0.94 ± 0.03 with an optimized accuracy of 0.89 ± 0.03 on a balanced data set. An introduced postprocessing algorithm for determining maximum diameter was used on both the predicted AAA segmentation and ground truth segmentation, predicting on average an absolute diameter error of 2.3 ± 2.0 mm by 1.4 ± 1.7 mm for each measurement, respectively. The algorithm measured AAA and endograft volume accurately (Dice coefficient, 0.95 ± 0.2) with an absolute volume error of 10.1 ± 9.1 mL. The algorithm measured endoleak volume less accurately, with a Dice score of 0.53 ± 0.21 and an average absolute volume error of 1.2 ± 1.9 mL. CONCLUSIONS: This machine learning algorithm shows promise in augmenting a human's ability to interpret postoperative CTA images and may help improve surveillance after endovascular aneurysm repair. External validation on larger data sets and prospective study are required before the algorithm can be clinically applicable.
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spelling pubmed-84892042021-10-05 Machine deep learning accurately detects endoleak after endovascular abdominal aortic aneurysm repair Hahn, Sage Perry, Mark Morris, Christopher S. Wshah, Safwan Bertges, Daniel J. JVS Vasc Sci Basic Reserch Study OBJECTIVE: The objective of this study was to develop a machine deep learning algorithm for endoleak detection and measurement of aneurysm diameter, area, and volume from computed tomography angiography (CTA). METHODS: Digital Imaging and Communications in Medicine files representing three-phase postoperative CTA images (N = 334) of 191 unique patients undergoing endovascular aneurysm repair for infrarenal abdominal aortic aneurysm (AAA) with a variety of commercial devices were used to train a deep learning pipeline across four tasks. The RetinaNet object-detection convolutional neural network (CNN) architecture was trained to predict bounding boxes around the axial CTA slices that were then stitched together in two dimensions into a smaller region containing the aneurysm. Multiclass endoleak detection and segmentation of the AAA, endograft, and endoleak were performed on this smaller region. Segmentations on a single randomly selected contrast from each scan included 33 full and 68 partial segmentations for endograft and AAA and 99 full segmentations for endoleak. A modified version of ResNet-50 CNN was used to detect endoleak on individual axial slices. A three-dimensional U-Net CNN model was trained on the task of dense three-dimensional segmentation and used to measure diameter and volume with a specially designed loss function. We made use of fivefold cross-validation to evaluate model performance for each step, splitting training and testing data at each fold, such that multiple scans from the same patient were preserved with the same fold. Algorithm predictions for endoleak were compared with the radiology report and with a subset of CTA images independently read by two vascular specialists. RESULTS: The localization portion of the network accurately predicted a region of interest containing the AAA in 99% of cases. The best model of binary endoleak detection obtained an area under the receiver operating characteristic curve of 0.94 ± 0.03 with an optimized accuracy of 0.89 ± 0.03 on a balanced data set. An introduced postprocessing algorithm for determining maximum diameter was used on both the predicted AAA segmentation and ground truth segmentation, predicting on average an absolute diameter error of 2.3 ± 2.0 mm by 1.4 ± 1.7 mm for each measurement, respectively. The algorithm measured AAA and endograft volume accurately (Dice coefficient, 0.95 ± 0.2) with an absolute volume error of 10.1 ± 9.1 mL. The algorithm measured endoleak volume less accurately, with a Dice score of 0.53 ± 0.21 and an average absolute volume error of 1.2 ± 1.9 mL. CONCLUSIONS: This machine learning algorithm shows promise in augmenting a human's ability to interpret postoperative CTA images and may help improve surveillance after endovascular aneurysm repair. External validation on larger data sets and prospective study are required before the algorithm can be clinically applicable. Elsevier 2020-01-07 /pmc/articles/PMC8489204/ /pubmed/34617036 http://dx.doi.org/10.1016/j.jvssci.2019.12.003 Text en © 2020 Published by Elsevier Inc. on behalf of the Society for Vascular Surgery. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Basic Reserch Study
Hahn, Sage
Perry, Mark
Morris, Christopher S.
Wshah, Safwan
Bertges, Daniel J.
Machine deep learning accurately detects endoleak after endovascular abdominal aortic aneurysm repair
title Machine deep learning accurately detects endoleak after endovascular abdominal aortic aneurysm repair
title_full Machine deep learning accurately detects endoleak after endovascular abdominal aortic aneurysm repair
title_fullStr Machine deep learning accurately detects endoleak after endovascular abdominal aortic aneurysm repair
title_full_unstemmed Machine deep learning accurately detects endoleak after endovascular abdominal aortic aneurysm repair
title_short Machine deep learning accurately detects endoleak after endovascular abdominal aortic aneurysm repair
title_sort machine deep learning accurately detects endoleak after endovascular abdominal aortic aneurysm repair
topic Basic Reserch Study
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8489204/
https://www.ncbi.nlm.nih.gov/pubmed/34617036
http://dx.doi.org/10.1016/j.jvssci.2019.12.003
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