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Chryseobacterium pennae sp. nov., isolated from poultry feather waste
A Gram-stain-negative, rod-shaped, non-motile, non-spore-forming, aerobic, yellow-pigmented bacterium was isolated from chicken feather waste collected from an abattoir in Bloemfontein, South Africa. A polyphasic taxonomy study was used to describe and name the bacterial isolate, strain 1_F178(T). T...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Microbiology Society
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8489843/ https://www.ncbi.nlm.nih.gov/pubmed/34292147 http://dx.doi.org/10.1099/ijsem.0.004912 |
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author | Nde, Adeline Lum Charimba, George Hitzeroth, Arina Oosthuizen, Lize Steyn, Laurinda Newman, Jeffrey D. Hugo, Celia |
author_facet | Nde, Adeline Lum Charimba, George Hitzeroth, Arina Oosthuizen, Lize Steyn, Laurinda Newman, Jeffrey D. Hugo, Celia |
author_sort | Nde, Adeline Lum |
collection | PubMed |
description | A Gram-stain-negative, rod-shaped, non-motile, non-spore-forming, aerobic, yellow-pigmented bacterium was isolated from chicken feather waste collected from an abattoir in Bloemfontein, South Africa. A polyphasic taxonomy study was used to describe and name the bacterial isolate, strain 1_F178(T). The 16S rRNA gene sequence analysis and sequence comparison data indicated that strain 1_F178(T) was a member of the genus Chryseobacterium and was closely related to Chryseobacterium jejuense (99.1%) and Chryseobacterium nakagawai (98.7%). Overall genome similarity metrics (average nucleotide identity, digital DNA–DNA hybridization and average amino acid identity) revealed greatest similarity to the C. jejuense and C. nakagawai type strains but were below the threshold for species delineation. Genome sequencing revealed a genome size of 6.18 Mbp and a G+C content of 35.6 mol%. The major respiratory quinone and most abundant polar lipid of strain 1_F178(T) were menaquinone-6 and phosphatidylethanolamine, respectively. Strain 1_F178(T) had a typical fatty acid composition for Chryseobacterium species. On the basis of physiological, genotypic, phylogenetic and chemotaxonomic data, strain 1_F178(T) constitutes a novel species of Chryseobacterium, for which the name Chryseobacterium pennae sp. nov. is proposed. The type strain is 1_F178(T) (=LMG 30779(T)=KCTC 62759(T)). |
format | Online Article Text |
id | pubmed-8489843 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Microbiology Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-84898432021-10-06 Chryseobacterium pennae sp. nov., isolated from poultry feather waste Nde, Adeline Lum Charimba, George Hitzeroth, Arina Oosthuizen, Lize Steyn, Laurinda Newman, Jeffrey D. Hugo, Celia Int J Syst Evol Microbiol New Taxa A Gram-stain-negative, rod-shaped, non-motile, non-spore-forming, aerobic, yellow-pigmented bacterium was isolated from chicken feather waste collected from an abattoir in Bloemfontein, South Africa. A polyphasic taxonomy study was used to describe and name the bacterial isolate, strain 1_F178(T). The 16S rRNA gene sequence analysis and sequence comparison data indicated that strain 1_F178(T) was a member of the genus Chryseobacterium and was closely related to Chryseobacterium jejuense (99.1%) and Chryseobacterium nakagawai (98.7%). Overall genome similarity metrics (average nucleotide identity, digital DNA–DNA hybridization and average amino acid identity) revealed greatest similarity to the C. jejuense and C. nakagawai type strains but were below the threshold for species delineation. Genome sequencing revealed a genome size of 6.18 Mbp and a G+C content of 35.6 mol%. The major respiratory quinone and most abundant polar lipid of strain 1_F178(T) were menaquinone-6 and phosphatidylethanolamine, respectively. Strain 1_F178(T) had a typical fatty acid composition for Chryseobacterium species. On the basis of physiological, genotypic, phylogenetic and chemotaxonomic data, strain 1_F178(T) constitutes a novel species of Chryseobacterium, for which the name Chryseobacterium pennae sp. nov. is proposed. The type strain is 1_F178(T) (=LMG 30779(T)=KCTC 62759(T)). Microbiology Society 2021-07-22 /pmc/articles/PMC8489843/ /pubmed/34292147 http://dx.doi.org/10.1099/ijsem.0.004912 Text en © 2021 The Authors https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution NonCommercial License. |
spellingShingle | New Taxa Nde, Adeline Lum Charimba, George Hitzeroth, Arina Oosthuizen, Lize Steyn, Laurinda Newman, Jeffrey D. Hugo, Celia Chryseobacterium pennae sp. nov., isolated from poultry feather waste |
title | Chryseobacterium pennae sp. nov., isolated from poultry feather waste |
title_full | Chryseobacterium pennae sp. nov., isolated from poultry feather waste |
title_fullStr | Chryseobacterium pennae sp. nov., isolated from poultry feather waste |
title_full_unstemmed | Chryseobacterium pennae sp. nov., isolated from poultry feather waste |
title_short | Chryseobacterium pennae sp. nov., isolated from poultry feather waste |
title_sort | chryseobacterium pennae sp. nov., isolated from poultry feather waste |
topic | New Taxa |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8489843/ https://www.ncbi.nlm.nih.gov/pubmed/34292147 http://dx.doi.org/10.1099/ijsem.0.004912 |
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