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Chryseobacterium pennae sp. nov., isolated from poultry feather waste

A Gram-stain-negative, rod-shaped, non-motile, non-spore-forming, aerobic, yellow-pigmented bacterium was isolated from chicken feather waste collected from an abattoir in Bloemfontein, South Africa. A polyphasic taxonomy study was used to describe and name the bacterial isolate, strain 1_F178(T). T...

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Autores principales: Nde, Adeline Lum, Charimba, George, Hitzeroth, Arina, Oosthuizen, Lize, Steyn, Laurinda, Newman, Jeffrey D., Hugo, Celia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8489843/
https://www.ncbi.nlm.nih.gov/pubmed/34292147
http://dx.doi.org/10.1099/ijsem.0.004912
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author Nde, Adeline Lum
Charimba, George
Hitzeroth, Arina
Oosthuizen, Lize
Steyn, Laurinda
Newman, Jeffrey D.
Hugo, Celia
author_facet Nde, Adeline Lum
Charimba, George
Hitzeroth, Arina
Oosthuizen, Lize
Steyn, Laurinda
Newman, Jeffrey D.
Hugo, Celia
author_sort Nde, Adeline Lum
collection PubMed
description A Gram-stain-negative, rod-shaped, non-motile, non-spore-forming, aerobic, yellow-pigmented bacterium was isolated from chicken feather waste collected from an abattoir in Bloemfontein, South Africa. A polyphasic taxonomy study was used to describe and name the bacterial isolate, strain 1_F178(T). The 16S rRNA gene sequence analysis and sequence comparison data indicated that strain 1_F178(T) was a member of the genus Chryseobacterium and was closely related to Chryseobacterium jejuense (99.1%) and Chryseobacterium nakagawai (98.7%). Overall genome similarity metrics (average nucleotide identity, digital DNA–DNA hybridization and average amino acid identity) revealed greatest similarity to the C. jejuense and C. nakagawai type strains but were below the threshold for species delineation. Genome sequencing revealed a genome size of 6.18 Mbp and a G+C content of 35.6 mol%. The major respiratory quinone and most abundant polar lipid of strain 1_F178(T) were menaquinone-6 and phosphatidylethanolamine, respectively. Strain 1_F178(T) had a typical fatty acid composition for Chryseobacterium species. On the basis of physiological, genotypic, phylogenetic and chemotaxonomic data, strain 1_F178(T) constitutes a novel species of Chryseobacterium, for which the name Chryseobacterium pennae sp. nov. is proposed. The type strain is 1_F178(T) (=LMG 30779(T)=KCTC 62759(T)).
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spelling pubmed-84898432021-10-06 Chryseobacterium pennae sp. nov., isolated from poultry feather waste Nde, Adeline Lum Charimba, George Hitzeroth, Arina Oosthuizen, Lize Steyn, Laurinda Newman, Jeffrey D. Hugo, Celia Int J Syst Evol Microbiol New Taxa A Gram-stain-negative, rod-shaped, non-motile, non-spore-forming, aerobic, yellow-pigmented bacterium was isolated from chicken feather waste collected from an abattoir in Bloemfontein, South Africa. A polyphasic taxonomy study was used to describe and name the bacterial isolate, strain 1_F178(T). The 16S rRNA gene sequence analysis and sequence comparison data indicated that strain 1_F178(T) was a member of the genus Chryseobacterium and was closely related to Chryseobacterium jejuense (99.1%) and Chryseobacterium nakagawai (98.7%). Overall genome similarity metrics (average nucleotide identity, digital DNA–DNA hybridization and average amino acid identity) revealed greatest similarity to the C. jejuense and C. nakagawai type strains but were below the threshold for species delineation. Genome sequencing revealed a genome size of 6.18 Mbp and a G+C content of 35.6 mol%. The major respiratory quinone and most abundant polar lipid of strain 1_F178(T) were menaquinone-6 and phosphatidylethanolamine, respectively. Strain 1_F178(T) had a typical fatty acid composition for Chryseobacterium species. On the basis of physiological, genotypic, phylogenetic and chemotaxonomic data, strain 1_F178(T) constitutes a novel species of Chryseobacterium, for which the name Chryseobacterium pennae sp. nov. is proposed. The type strain is 1_F178(T) (=LMG 30779(T)=KCTC 62759(T)). Microbiology Society 2021-07-22 /pmc/articles/PMC8489843/ /pubmed/34292147 http://dx.doi.org/10.1099/ijsem.0.004912 Text en © 2021 The Authors https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution NonCommercial License.
spellingShingle New Taxa
Nde, Adeline Lum
Charimba, George
Hitzeroth, Arina
Oosthuizen, Lize
Steyn, Laurinda
Newman, Jeffrey D.
Hugo, Celia
Chryseobacterium pennae sp. nov., isolated from poultry feather waste
title Chryseobacterium pennae sp. nov., isolated from poultry feather waste
title_full Chryseobacterium pennae sp. nov., isolated from poultry feather waste
title_fullStr Chryseobacterium pennae sp. nov., isolated from poultry feather waste
title_full_unstemmed Chryseobacterium pennae sp. nov., isolated from poultry feather waste
title_short Chryseobacterium pennae sp. nov., isolated from poultry feather waste
title_sort chryseobacterium pennae sp. nov., isolated from poultry feather waste
topic New Taxa
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8489843/
https://www.ncbi.nlm.nih.gov/pubmed/34292147
http://dx.doi.org/10.1099/ijsem.0.004912
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