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Mauritia flexuosa palm trees airborne mapping with deep convolutional neural network

Accurately mapping individual tree species in densely forested environments is crucial to forest inventory. When considering only RGB images, this is a challenging task for many automatic photogrammetry processes. The main reason for that is the spectral similarity between species in RGB scenes, whi...

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Autores principales: Arce, Luciene Sales Dagher, Osco, Lucas Prado, Arruda, Mauro dos Santos de, Furuya, Danielle Elis Garcia, Ramos, Ana Paula Marques, Aoki, Camila, Pott, Arnildo, Fatholahi, Sarah, Li, Jonathan, Araújo, Fábio Fernando de, Gonçalves, Wesley Nunes, Marcato Junior, José
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8490414/
https://www.ncbi.nlm.nih.gov/pubmed/34608181
http://dx.doi.org/10.1038/s41598-021-98522-7
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author Arce, Luciene Sales Dagher
Osco, Lucas Prado
Arruda, Mauro dos Santos de
Furuya, Danielle Elis Garcia
Ramos, Ana Paula Marques
Aoki, Camila
Pott, Arnildo
Fatholahi, Sarah
Li, Jonathan
Araújo, Fábio Fernando de
Gonçalves, Wesley Nunes
Marcato Junior, José
author_facet Arce, Luciene Sales Dagher
Osco, Lucas Prado
Arruda, Mauro dos Santos de
Furuya, Danielle Elis Garcia
Ramos, Ana Paula Marques
Aoki, Camila
Pott, Arnildo
Fatholahi, Sarah
Li, Jonathan
Araújo, Fábio Fernando de
Gonçalves, Wesley Nunes
Marcato Junior, José
author_sort Arce, Luciene Sales Dagher
collection PubMed
description Accurately mapping individual tree species in densely forested environments is crucial to forest inventory. When considering only RGB images, this is a challenging task for many automatic photogrammetry processes. The main reason for that is the spectral similarity between species in RGB scenes, which can be a hindrance for most automatic methods. This paper presents a deep learning-based approach to detect an important multi-use species of palm trees (Mauritia flexuosa; i.e., Buriti) on aerial RGB imagery. In South-America, this palm tree is essential for many indigenous and local communities because of its characteristics. The species is also a valuable indicator of water resources, which comes as a benefit for mapping its location. The method is based on a Convolutional Neural Network (CNN) to identify and geolocate singular tree species in a high-complexity forest environment. The results returned a mean absolute error (MAE) of 0.75 trees and an F1-measure of 86.9%. These results are better than Faster R-CNN and RetinaNet methods considering equal experiment conditions. In conclusion, the method presented is efficient to deal with a high-density forest scenario and can accurately map the location of single species like the M. flexuosa palm tree and may be useful for future frameworks.
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spelling pubmed-84904142021-10-05 Mauritia flexuosa palm trees airborne mapping with deep convolutional neural network Arce, Luciene Sales Dagher Osco, Lucas Prado Arruda, Mauro dos Santos de Furuya, Danielle Elis Garcia Ramos, Ana Paula Marques Aoki, Camila Pott, Arnildo Fatholahi, Sarah Li, Jonathan Araújo, Fábio Fernando de Gonçalves, Wesley Nunes Marcato Junior, José Sci Rep Article Accurately mapping individual tree species in densely forested environments is crucial to forest inventory. When considering only RGB images, this is a challenging task for many automatic photogrammetry processes. The main reason for that is the spectral similarity between species in RGB scenes, which can be a hindrance for most automatic methods. This paper presents a deep learning-based approach to detect an important multi-use species of palm trees (Mauritia flexuosa; i.e., Buriti) on aerial RGB imagery. In South-America, this palm tree is essential for many indigenous and local communities because of its characteristics. The species is also a valuable indicator of water resources, which comes as a benefit for mapping its location. The method is based on a Convolutional Neural Network (CNN) to identify and geolocate singular tree species in a high-complexity forest environment. The results returned a mean absolute error (MAE) of 0.75 trees and an F1-measure of 86.9%. These results are better than Faster R-CNN and RetinaNet methods considering equal experiment conditions. In conclusion, the method presented is efficient to deal with a high-density forest scenario and can accurately map the location of single species like the M. flexuosa palm tree and may be useful for future frameworks. Nature Publishing Group UK 2021-10-04 /pmc/articles/PMC8490414/ /pubmed/34608181 http://dx.doi.org/10.1038/s41598-021-98522-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Arce, Luciene Sales Dagher
Osco, Lucas Prado
Arruda, Mauro dos Santos de
Furuya, Danielle Elis Garcia
Ramos, Ana Paula Marques
Aoki, Camila
Pott, Arnildo
Fatholahi, Sarah
Li, Jonathan
Araújo, Fábio Fernando de
Gonçalves, Wesley Nunes
Marcato Junior, José
Mauritia flexuosa palm trees airborne mapping with deep convolutional neural network
title Mauritia flexuosa palm trees airborne mapping with deep convolutional neural network
title_full Mauritia flexuosa palm trees airborne mapping with deep convolutional neural network
title_fullStr Mauritia flexuosa palm trees airborne mapping with deep convolutional neural network
title_full_unstemmed Mauritia flexuosa palm trees airborne mapping with deep convolutional neural network
title_short Mauritia flexuosa palm trees airborne mapping with deep convolutional neural network
title_sort mauritia flexuosa palm trees airborne mapping with deep convolutional neural network
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8490414/
https://www.ncbi.nlm.nih.gov/pubmed/34608181
http://dx.doi.org/10.1038/s41598-021-98522-7
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