Cargando…
HIF-1α Pulmonary Phenotype Wide Association Study Unveils a Link to Inflammatory Airway Conditions
Despite experimental data linking HIF-1α dysfunction to inflammatory airway conditions, the effect of single nucleotide polymorphisms within the HIF1A gene on these conditions remains poorly understood. In the current study, we complete a phenotype wide association study to assess the link between S...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8490729/ https://www.ncbi.nlm.nih.gov/pubmed/34621299 http://dx.doi.org/10.3389/fgene.2021.756645 |
_version_ | 1784578578991546368 |
---|---|
author | Kelchtermans, Jelte Chang, Xiao March, Michael E. Mentch, Frank Sleiman, Patrick M. A. Hakonarson, Hakon |
author_facet | Kelchtermans, Jelte Chang, Xiao March, Michael E. Mentch, Frank Sleiman, Patrick M. A. Hakonarson, Hakon |
author_sort | Kelchtermans, Jelte |
collection | PubMed |
description | Despite experimental data linking HIF-1α dysfunction to inflammatory airway conditions, the effect of single nucleotide polymorphisms within the HIF1A gene on these conditions remains poorly understood. In the current study, we complete a phenotype wide association study to assess the link between SNPs with known disease associations and respiratory phenotypes. We report two SNPs of the HIF1A gene, the intronic rs79865957 and the missense rs41508050. In these positions the A and the T allele are significantly associated with allergic rhinitis and acute bronchitis and bronchiolitis, respectively. These findings further support the role of HIF-1α in inflammatory pulmonary conditions and may serve as a basis to refine our understanding of other HIF-1α associated phenotypes. |
format | Online Article Text |
id | pubmed-8490729 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-84907292021-10-06 HIF-1α Pulmonary Phenotype Wide Association Study Unveils a Link to Inflammatory Airway Conditions Kelchtermans, Jelte Chang, Xiao March, Michael E. Mentch, Frank Sleiman, Patrick M. A. Hakonarson, Hakon Front Genet Genetics Despite experimental data linking HIF-1α dysfunction to inflammatory airway conditions, the effect of single nucleotide polymorphisms within the HIF1A gene on these conditions remains poorly understood. In the current study, we complete a phenotype wide association study to assess the link between SNPs with known disease associations and respiratory phenotypes. We report two SNPs of the HIF1A gene, the intronic rs79865957 and the missense rs41508050. In these positions the A and the T allele are significantly associated with allergic rhinitis and acute bronchitis and bronchiolitis, respectively. These findings further support the role of HIF-1α in inflammatory pulmonary conditions and may serve as a basis to refine our understanding of other HIF-1α associated phenotypes. Frontiers Media S.A. 2021-09-21 /pmc/articles/PMC8490729/ /pubmed/34621299 http://dx.doi.org/10.3389/fgene.2021.756645 Text en Copyright © 2021 Kelchtermans, Chang, March, Mentch, Sleiman and Hakonarson. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Kelchtermans, Jelte Chang, Xiao March, Michael E. Mentch, Frank Sleiman, Patrick M. A. Hakonarson, Hakon HIF-1α Pulmonary Phenotype Wide Association Study Unveils a Link to Inflammatory Airway Conditions |
title | HIF-1α Pulmonary Phenotype Wide Association Study Unveils a Link to Inflammatory Airway Conditions |
title_full | HIF-1α Pulmonary Phenotype Wide Association Study Unveils a Link to Inflammatory Airway Conditions |
title_fullStr | HIF-1α Pulmonary Phenotype Wide Association Study Unveils a Link to Inflammatory Airway Conditions |
title_full_unstemmed | HIF-1α Pulmonary Phenotype Wide Association Study Unveils a Link to Inflammatory Airway Conditions |
title_short | HIF-1α Pulmonary Phenotype Wide Association Study Unveils a Link to Inflammatory Airway Conditions |
title_sort | hif-1α pulmonary phenotype wide association study unveils a link to inflammatory airway conditions |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8490729/ https://www.ncbi.nlm.nih.gov/pubmed/34621299 http://dx.doi.org/10.3389/fgene.2021.756645 |
work_keys_str_mv | AT kelchtermansjelte hif1apulmonaryphenotypewideassociationstudyunveilsalinktoinflammatoryairwayconditions AT changxiao hif1apulmonaryphenotypewideassociationstudyunveilsalinktoinflammatoryairwayconditions AT marchmichaele hif1apulmonaryphenotypewideassociationstudyunveilsalinktoinflammatoryairwayconditions AT mentchfrank hif1apulmonaryphenotypewideassociationstudyunveilsalinktoinflammatoryairwayconditions AT sleimanpatrickma hif1apulmonaryphenotypewideassociationstudyunveilsalinktoinflammatoryairwayconditions AT hakonarsonhakon hif1apulmonaryphenotypewideassociationstudyunveilsalinktoinflammatoryairwayconditions |