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Determination of the Near-Atomic Structure of Non-Purified Oligomeric E. coli Proteins
The roughly purified extract of E. coli proteins has been studied by cryoelectron microscopy, the class-sums containing 2D projections of two proteins (β-galactosidase and 2-oxoglutarate dehydrogenase complex catalytic domain (ODC-CD)), identified in an extract by tandem mass spectrometry, have been...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Pleiades Publishing
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8490847/ https://www.ncbi.nlm.nih.gov/pubmed/35173403 http://dx.doi.org/10.1134/S1063774521050187 |
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author | Pichkur, E. B. Mikirtumov, V. I. Tikhonova, O. V. Derkacheva, N. I. Kurochkina, L. P. Sokolova, O. S. |
author_facet | Pichkur, E. B. Mikirtumov, V. I. Tikhonova, O. V. Derkacheva, N. I. Kurochkina, L. P. Sokolova, O. S. |
author_sort | Pichkur, E. B. |
collection | PubMed |
description | The roughly purified extract of E. coli proteins has been studied by cryoelectron microscopy, the class-sums containing 2D projections of two proteins (β-galactosidase and 2-oxoglutarate dehydrogenase complex catalytic domain (ODC-CD)), identified in an extract by tandem mass spectrometry, have been distinguished. The structures of these proteins have been solved at near-atomic resolution. De novo simulation of the ODC-CD structure yielded an atomic model that revealed differences in the positions of some amino acid residues of the active center, in comparison with the known crystal structures. |
format | Online Article Text |
id | pubmed-8490847 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Pleiades Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-84908472021-10-05 Determination of the Near-Atomic Structure of Non-Purified Oligomeric E. coli Proteins Pichkur, E. B. Mikirtumov, V. I. Tikhonova, O. V. Derkacheva, N. I. Kurochkina, L. P. Sokolova, O. S. Crystallogr. Rep. Structure of Macromolecular Compounds The roughly purified extract of E. coli proteins has been studied by cryoelectron microscopy, the class-sums containing 2D projections of two proteins (β-galactosidase and 2-oxoglutarate dehydrogenase complex catalytic domain (ODC-CD)), identified in an extract by tandem mass spectrometry, have been distinguished. The structures of these proteins have been solved at near-atomic resolution. De novo simulation of the ODC-CD structure yielded an atomic model that revealed differences in the positions of some amino acid residues of the active center, in comparison with the known crystal structures. Pleiades Publishing 2021-10-05 2021 /pmc/articles/PMC8490847/ /pubmed/35173403 http://dx.doi.org/10.1134/S1063774521050187 Text en © Pleiades Publishing, Inc. 2021, ISSN 1063-7745, Crystallography Reports, 2021, Vol. 66, No. 5, pp. 854–860. © Pleiades Publishing, Inc., 2021.Russian Text © The Author(s), 2021, published in Kristallografiya, 2021, Vol. 66, No. 5, pp. 829–835. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Structure of Macromolecular Compounds Pichkur, E. B. Mikirtumov, V. I. Tikhonova, O. V. Derkacheva, N. I. Kurochkina, L. P. Sokolova, O. S. Determination of the Near-Atomic Structure of Non-Purified Oligomeric E. coli Proteins |
title | Determination of the Near-Atomic Structure of Non-Purified Oligomeric E. coli Proteins |
title_full | Determination of the Near-Atomic Structure of Non-Purified Oligomeric E. coli Proteins |
title_fullStr | Determination of the Near-Atomic Structure of Non-Purified Oligomeric E. coli Proteins |
title_full_unstemmed | Determination of the Near-Atomic Structure of Non-Purified Oligomeric E. coli Proteins |
title_short | Determination of the Near-Atomic Structure of Non-Purified Oligomeric E. coli Proteins |
title_sort | determination of the near-atomic structure of non-purified oligomeric e. coli proteins |
topic | Structure of Macromolecular Compounds |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8490847/ https://www.ncbi.nlm.nih.gov/pubmed/35173403 http://dx.doi.org/10.1134/S1063774521050187 |
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