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Deep neural networks ensemble to detect COVID-19 from CT scans

Research on Coronavirus Disease 2019 (COVID-19) detection methods has increased in the last months as more accurate automated toolkits are required. Recent studies show that CT scan images contain useful information to detect the COVID-19 disease. However, the scarcity of large and well balanced dat...

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Autores principales: Aversano, Lerina, Bernardi, Mario Luca, Cimitile, Marta, Pecori, Riccardo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8494191/
https://www.ncbi.nlm.nih.gov/pubmed/34642504
http://dx.doi.org/10.1016/j.patcog.2021.108135
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author Aversano, Lerina
Bernardi, Mario Luca
Cimitile, Marta
Pecori, Riccardo
author_facet Aversano, Lerina
Bernardi, Mario Luca
Cimitile, Marta
Pecori, Riccardo
author_sort Aversano, Lerina
collection PubMed
description Research on Coronavirus Disease 2019 (COVID-19) detection methods has increased in the last months as more accurate automated toolkits are required. Recent studies show that CT scan images contain useful information to detect the COVID-19 disease. However, the scarcity of large and well balanced datasets limits the possibility of using detection approaches in real diagnostic contexts as they are unable to generalize. Indeed, the performance of these models quickly becomes inadequate when applied to samples captured in different contexts (e.g., different equipment or populations) from those used in the training phase. In this paper, a novel ensemble-based approach for more accurate COVID-19 disease detection using CT scan images is proposed. This work exploits transfer learning using pre-trained deep networks (e.g., VGG, Xception, and ResNet) evolved with a genetic algorithm, combined into an ensemble architecture for the classification of clustered images of lung lobes. The study is validated on a new dataset obtained as an integration of existing ones. The results of the experimental evaluation show that the ensemble classifier ensures effective performance, also exhibiting better generalization capabilities.
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spelling pubmed-84941912021-10-08 Deep neural networks ensemble to detect COVID-19 from CT scans Aversano, Lerina Bernardi, Mario Luca Cimitile, Marta Pecori, Riccardo Pattern Recognit Article Research on Coronavirus Disease 2019 (COVID-19) detection methods has increased in the last months as more accurate automated toolkits are required. Recent studies show that CT scan images contain useful information to detect the COVID-19 disease. However, the scarcity of large and well balanced datasets limits the possibility of using detection approaches in real diagnostic contexts as they are unable to generalize. Indeed, the performance of these models quickly becomes inadequate when applied to samples captured in different contexts (e.g., different equipment or populations) from those used in the training phase. In this paper, a novel ensemble-based approach for more accurate COVID-19 disease detection using CT scan images is proposed. This work exploits transfer learning using pre-trained deep networks (e.g., VGG, Xception, and ResNet) evolved with a genetic algorithm, combined into an ensemble architecture for the classification of clustered images of lung lobes. The study is validated on a new dataset obtained as an integration of existing ones. The results of the experimental evaluation show that the ensemble classifier ensures effective performance, also exhibiting better generalization capabilities. Elsevier Ltd. 2021-12 2021-07-07 /pmc/articles/PMC8494191/ /pubmed/34642504 http://dx.doi.org/10.1016/j.patcog.2021.108135 Text en © 2021 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Aversano, Lerina
Bernardi, Mario Luca
Cimitile, Marta
Pecori, Riccardo
Deep neural networks ensemble to detect COVID-19 from CT scans
title Deep neural networks ensemble to detect COVID-19 from CT scans
title_full Deep neural networks ensemble to detect COVID-19 from CT scans
title_fullStr Deep neural networks ensemble to detect COVID-19 from CT scans
title_full_unstemmed Deep neural networks ensemble to detect COVID-19 from CT scans
title_short Deep neural networks ensemble to detect COVID-19 from CT scans
title_sort deep neural networks ensemble to detect covid-19 from ct scans
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8494191/
https://www.ncbi.nlm.nih.gov/pubmed/34642504
http://dx.doi.org/10.1016/j.patcog.2021.108135
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