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Marine dissolved organic matter: a vast and unexplored molecular space
ABSTRACT: Marine dissolved organic matter (DOM) comprises a vast and unexplored molecular space. Most of it resided in the oceans for thousands of years. It is among the most diverse molecular mixtures known, consisting of millions of individual compounds. More than 1 Eg of this material exists on t...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8494709/ https://www.ncbi.nlm.nih.gov/pubmed/34536106 http://dx.doi.org/10.1007/s00253-021-11489-3 |
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author | Catalá, Teresa S. Shorte, Spencer Dittmar, Thorsten |
author_facet | Catalá, Teresa S. Shorte, Spencer Dittmar, Thorsten |
author_sort | Catalá, Teresa S. |
collection | PubMed |
description | ABSTRACT: Marine dissolved organic matter (DOM) comprises a vast and unexplored molecular space. Most of it resided in the oceans for thousands of years. It is among the most diverse molecular mixtures known, consisting of millions of individual compounds. More than 1 Eg of this material exists on the planet. As such, it comprises a formidable source of natural products promising significant potential for new biotechnological purposes. Great emphasis has been placed on understanding the role of DOM in biogeochemical cycles and climate attenuation, its lifespan, interaction with microorganisms, as well as its molecular composition. Yet, probing DOM bioactivities is in its infancy, largely because it is technically challenging due to the chemical complexity of the material. It is of considerable interest to develop technologies capable to better discern DOM bioactivities. Modern screening technologies are opening new avenues allowing accelerated identification of bioactivities for small molecules from natural products. These methods diminish a priori the need for laborious chemical fractionation. We examine here the application of untargeted metabolomics and multiplexed high-throughput molecular-phenotypic screening techniques that are providing first insights on previously undetectable DOM bioactivities. KEY POINTS: • Marine DOM is a vast, unexplored biotechnological resource. • Untargeted bioscreening approaches are emerging for natural product screening. • Perspectives for developing bioscreening platforms for marine DOM are discussed. |
format | Online Article Text |
id | pubmed-8494709 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-84947092021-10-19 Marine dissolved organic matter: a vast and unexplored molecular space Catalá, Teresa S. Shorte, Spencer Dittmar, Thorsten Appl Microbiol Biotechnol Mini-Review ABSTRACT: Marine dissolved organic matter (DOM) comprises a vast and unexplored molecular space. Most of it resided in the oceans for thousands of years. It is among the most diverse molecular mixtures known, consisting of millions of individual compounds. More than 1 Eg of this material exists on the planet. As such, it comprises a formidable source of natural products promising significant potential for new biotechnological purposes. Great emphasis has been placed on understanding the role of DOM in biogeochemical cycles and climate attenuation, its lifespan, interaction with microorganisms, as well as its molecular composition. Yet, probing DOM bioactivities is in its infancy, largely because it is technically challenging due to the chemical complexity of the material. It is of considerable interest to develop technologies capable to better discern DOM bioactivities. Modern screening technologies are opening new avenues allowing accelerated identification of bioactivities for small molecules from natural products. These methods diminish a priori the need for laborious chemical fractionation. We examine here the application of untargeted metabolomics and multiplexed high-throughput molecular-phenotypic screening techniques that are providing first insights on previously undetectable DOM bioactivities. KEY POINTS: • Marine DOM is a vast, unexplored biotechnological resource. • Untargeted bioscreening approaches are emerging for natural product screening. • Perspectives for developing bioscreening platforms for marine DOM are discussed. Springer Berlin Heidelberg 2021-09-18 2021 /pmc/articles/PMC8494709/ /pubmed/34536106 http://dx.doi.org/10.1007/s00253-021-11489-3 Text en © The Author(s) 2022, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Mini-Review Catalá, Teresa S. Shorte, Spencer Dittmar, Thorsten Marine dissolved organic matter: a vast and unexplored molecular space |
title | Marine dissolved organic matter: a vast and unexplored molecular space |
title_full | Marine dissolved organic matter: a vast and unexplored molecular space |
title_fullStr | Marine dissolved organic matter: a vast and unexplored molecular space |
title_full_unstemmed | Marine dissolved organic matter: a vast and unexplored molecular space |
title_short | Marine dissolved organic matter: a vast and unexplored molecular space |
title_sort | marine dissolved organic matter: a vast and unexplored molecular space |
topic | Mini-Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8494709/ https://www.ncbi.nlm.nih.gov/pubmed/34536106 http://dx.doi.org/10.1007/s00253-021-11489-3 |
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