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Automated audio recording as a means of surveying tinamous (Tinamidae) in the Peruvian Amazon

1. The use of machine learning technologies to process large quantities of remotely collected audio data is a powerful emerging research tool in ecology and conservation. 2. We applied these methods to a field study of tinamou (Tinamidae) biology in Madre de Dios, Peru, a region expected to have hig...

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Autores principales: Rumelt, Reid B., Basto, Arianna, Mere Roncal, Carla
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8495786/
https://www.ncbi.nlm.nih.gov/pubmed/34646487
http://dx.doi.org/10.1002/ece3.8078
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author Rumelt, Reid B.
Basto, Arianna
Mere Roncal, Carla
author_facet Rumelt, Reid B.
Basto, Arianna
Mere Roncal, Carla
author_sort Rumelt, Reid B.
collection PubMed
description 1. The use of machine learning technologies to process large quantities of remotely collected audio data is a powerful emerging research tool in ecology and conservation. 2. We applied these methods to a field study of tinamou (Tinamidae) biology in Madre de Dios, Peru, a region expected to have high levels of interspecies competition and niche partitioning as a result of high tinamou alpha diversity. We used autonomous recording units to gather environmental audio over a period of several months at lowland rainforest sites in the Los Amigos Conservation Concession and developed a Convolutional Neural Network‐based data processing pipeline to detect tinamou vocalizations in the dataset. 3. The classified acoustic event data are comparable to similar metrics derived from an ongoing camera trapping survey at the same site, and it should be possible to combine the two datasets for future explorations of the target species' niche space parameters. 4. Here, we provide an overview of the methodology used in the data collection and processing pipeline, offer general suggestions for processing large amounts of environmental audio data, and demonstrate how data collected in this manner can be used to answer questions about bird biology.
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spelling pubmed-84957862021-10-12 Automated audio recording as a means of surveying tinamous (Tinamidae) in the Peruvian Amazon Rumelt, Reid B. Basto, Arianna Mere Roncal, Carla Ecol Evol Original Research 1. The use of machine learning technologies to process large quantities of remotely collected audio data is a powerful emerging research tool in ecology and conservation. 2. We applied these methods to a field study of tinamou (Tinamidae) biology in Madre de Dios, Peru, a region expected to have high levels of interspecies competition and niche partitioning as a result of high tinamou alpha diversity. We used autonomous recording units to gather environmental audio over a period of several months at lowland rainforest sites in the Los Amigos Conservation Concession and developed a Convolutional Neural Network‐based data processing pipeline to detect tinamou vocalizations in the dataset. 3. The classified acoustic event data are comparable to similar metrics derived from an ongoing camera trapping survey at the same site, and it should be possible to combine the two datasets for future explorations of the target species' niche space parameters. 4. Here, we provide an overview of the methodology used in the data collection and processing pipeline, offer general suggestions for processing large amounts of environmental audio data, and demonstrate how data collected in this manner can be used to answer questions about bird biology. John Wiley and Sons Inc. 2021-09-03 /pmc/articles/PMC8495786/ /pubmed/34646487 http://dx.doi.org/10.1002/ece3.8078 Text en © 2021 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Rumelt, Reid B.
Basto, Arianna
Mere Roncal, Carla
Automated audio recording as a means of surveying tinamous (Tinamidae) in the Peruvian Amazon
title Automated audio recording as a means of surveying tinamous (Tinamidae) in the Peruvian Amazon
title_full Automated audio recording as a means of surveying tinamous (Tinamidae) in the Peruvian Amazon
title_fullStr Automated audio recording as a means of surveying tinamous (Tinamidae) in the Peruvian Amazon
title_full_unstemmed Automated audio recording as a means of surveying tinamous (Tinamidae) in the Peruvian Amazon
title_short Automated audio recording as a means of surveying tinamous (Tinamidae) in the Peruvian Amazon
title_sort automated audio recording as a means of surveying tinamous (tinamidae) in the peruvian amazon
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8495786/
https://www.ncbi.nlm.nih.gov/pubmed/34646487
http://dx.doi.org/10.1002/ece3.8078
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