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Hierarchical Censored Bayesian Analysis of Visual Field Progression
PURPOSE: To develop a Bayesian model (BM) for visual field (VF) progression accounting for the hierarchical, censored and heteroskedastic nature of the data. METHODS: Three versions of a hierarchical BM were developed: a simple linear (Hi-linear); censored at 0 dB (Hi-censored); heteroskedastic cens...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Association for Research in Vision and Ophthalmology
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8496414/ https://www.ncbi.nlm.nih.gov/pubmed/34609479 http://dx.doi.org/10.1167/tvst.10.12.4 |
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author | Montesano, Giovanni Garway-Heath, David F. Ometto, Giovanni Crabb, David P. |
author_facet | Montesano, Giovanni Garway-Heath, David F. Ometto, Giovanni Crabb, David P. |
author_sort | Montesano, Giovanni |
collection | PubMed |
description | PURPOSE: To develop a Bayesian model (BM) for visual field (VF) progression accounting for the hierarchical, censored and heteroskedastic nature of the data. METHODS: Three versions of a hierarchical BM were developed: a simple linear (Hi-linear); censored at 0 dB (Hi-censored); heteroskedastic censored (Hi-HSK). For the latter, we modeled the test variability according to VF sensitivity using a large test-retest cohort (1396 VFs, 146 eyes with glaucoma). We analyzed a large cohort of 44,371 VF tests from 3352 eyes from five glaucoma clinics. We quantified the bias in the estimated rate-of-progression, the detection of progression (Hit-rate [HR]), the median time-to-progression and the prediction error of future observations (mean absolute error [MAE]). HR and time-to-progression were compared at matched false-positive-rate (FPR), quantified using permutations of a separate test-retest cohort (360 tests, 30 eyes with glaucoma). BMs were compared to simple linear regression and Permutation-Analyses-of Pointwise-Linear-Regression. Differences in time-to-progression were tested using survival analysis. RESULTS: Censored models showed the smallest bias in the rate-of-progression. The three BMs performed very similarly in terms of HR and time-to-progression and always better than the other methods. The average reduction in time-to-progression was 37% with the BMs (P < 0.001) at 5% FPR. MAE for prediction was very similar among methods. CONCLUSIONS: Bayesian hierarchical models improved the detection of VF progression. Accounting for censoring improves the precision of the estimates, but minimal effect is provided by accounting for heteroskedasticity. TRANSLATIONAL RELEVANCE: These results are relevant for quantification of VF progression in practice and for clinical trials. |
format | Online Article Text |
id | pubmed-8496414 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Association for Research in Vision and Ophthalmology |
record_format | MEDLINE/PubMed |
spelling | pubmed-84964142021-10-26 Hierarchical Censored Bayesian Analysis of Visual Field Progression Montesano, Giovanni Garway-Heath, David F. Ometto, Giovanni Crabb, David P. Transl Vis Sci Technol Article PURPOSE: To develop a Bayesian model (BM) for visual field (VF) progression accounting for the hierarchical, censored and heteroskedastic nature of the data. METHODS: Three versions of a hierarchical BM were developed: a simple linear (Hi-linear); censored at 0 dB (Hi-censored); heteroskedastic censored (Hi-HSK). For the latter, we modeled the test variability according to VF sensitivity using a large test-retest cohort (1396 VFs, 146 eyes with glaucoma). We analyzed a large cohort of 44,371 VF tests from 3352 eyes from five glaucoma clinics. We quantified the bias in the estimated rate-of-progression, the detection of progression (Hit-rate [HR]), the median time-to-progression and the prediction error of future observations (mean absolute error [MAE]). HR and time-to-progression were compared at matched false-positive-rate (FPR), quantified using permutations of a separate test-retest cohort (360 tests, 30 eyes with glaucoma). BMs were compared to simple linear regression and Permutation-Analyses-of Pointwise-Linear-Regression. Differences in time-to-progression were tested using survival analysis. RESULTS: Censored models showed the smallest bias in the rate-of-progression. The three BMs performed very similarly in terms of HR and time-to-progression and always better than the other methods. The average reduction in time-to-progression was 37% with the BMs (P < 0.001) at 5% FPR. MAE for prediction was very similar among methods. CONCLUSIONS: Bayesian hierarchical models improved the detection of VF progression. Accounting for censoring improves the precision of the estimates, but minimal effect is provided by accounting for heteroskedasticity. TRANSLATIONAL RELEVANCE: These results are relevant for quantification of VF progression in practice and for clinical trials. The Association for Research in Vision and Ophthalmology 2021-10-05 /pmc/articles/PMC8496414/ /pubmed/34609479 http://dx.doi.org/10.1167/tvst.10.12.4 Text en Copyright 2021 The Authors https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License. |
spellingShingle | Article Montesano, Giovanni Garway-Heath, David F. Ometto, Giovanni Crabb, David P. Hierarchical Censored Bayesian Analysis of Visual Field Progression |
title | Hierarchical Censored Bayesian Analysis of Visual Field Progression |
title_full | Hierarchical Censored Bayesian Analysis of Visual Field Progression |
title_fullStr | Hierarchical Censored Bayesian Analysis of Visual Field Progression |
title_full_unstemmed | Hierarchical Censored Bayesian Analysis of Visual Field Progression |
title_short | Hierarchical Censored Bayesian Analysis of Visual Field Progression |
title_sort | hierarchical censored bayesian analysis of visual field progression |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8496414/ https://www.ncbi.nlm.nih.gov/pubmed/34609479 http://dx.doi.org/10.1167/tvst.10.12.4 |
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