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Hierarchical Censored Bayesian Analysis of Visual Field Progression

PURPOSE: To develop a Bayesian model (BM) for visual field (VF) progression accounting for the hierarchical, censored and heteroskedastic nature of the data. METHODS: Three versions of a hierarchical BM were developed: a simple linear (Hi-linear); censored at 0 dB (Hi-censored); heteroskedastic cens...

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Autores principales: Montesano, Giovanni, Garway-Heath, David F., Ometto, Giovanni, Crabb, David P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8496414/
https://www.ncbi.nlm.nih.gov/pubmed/34609479
http://dx.doi.org/10.1167/tvst.10.12.4
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author Montesano, Giovanni
Garway-Heath, David F.
Ometto, Giovanni
Crabb, David P.
author_facet Montesano, Giovanni
Garway-Heath, David F.
Ometto, Giovanni
Crabb, David P.
author_sort Montesano, Giovanni
collection PubMed
description PURPOSE: To develop a Bayesian model (BM) for visual field (VF) progression accounting for the hierarchical, censored and heteroskedastic nature of the data. METHODS: Three versions of a hierarchical BM were developed: a simple linear (Hi-linear); censored at 0 dB (Hi-censored); heteroskedastic censored (Hi-HSK). For the latter, we modeled the test variability according to VF sensitivity using a large test-retest cohort (1396 VFs, 146 eyes with glaucoma). We analyzed a large cohort of 44,371 VF tests from 3352 eyes from five glaucoma clinics. We quantified the bias in the estimated rate-of-progression, the detection of progression (Hit-rate [HR]), the median time-to-progression and the prediction error of future observations (mean absolute error [MAE]). HR and time-to-progression were compared at matched false-positive-rate (FPR), quantified using permutations of a separate test-retest cohort (360 tests, 30 eyes with glaucoma). BMs were compared to simple linear regression and Permutation-Analyses-of Pointwise-Linear-Regression. Differences in time-to-progression were tested using survival analysis. RESULTS: Censored models showed the smallest bias in the rate-of-progression. The three BMs performed very similarly in terms of HR and time-to-progression and always better than the other methods. The average reduction in time-to-progression was 37% with the BMs (P < 0.001) at 5% FPR. MAE for prediction was very similar among methods. CONCLUSIONS: Bayesian hierarchical models improved the detection of VF progression. Accounting for censoring improves the precision of the estimates, but minimal effect is provided by accounting for heteroskedasticity. TRANSLATIONAL RELEVANCE: These results are relevant for quantification of VF progression in practice and for clinical trials.
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spelling pubmed-84964142021-10-26 Hierarchical Censored Bayesian Analysis of Visual Field Progression Montesano, Giovanni Garway-Heath, David F. Ometto, Giovanni Crabb, David P. Transl Vis Sci Technol Article PURPOSE: To develop a Bayesian model (BM) for visual field (VF) progression accounting for the hierarchical, censored and heteroskedastic nature of the data. METHODS: Three versions of a hierarchical BM were developed: a simple linear (Hi-linear); censored at 0 dB (Hi-censored); heteroskedastic censored (Hi-HSK). For the latter, we modeled the test variability according to VF sensitivity using a large test-retest cohort (1396 VFs, 146 eyes with glaucoma). We analyzed a large cohort of 44,371 VF tests from 3352 eyes from five glaucoma clinics. We quantified the bias in the estimated rate-of-progression, the detection of progression (Hit-rate [HR]), the median time-to-progression and the prediction error of future observations (mean absolute error [MAE]). HR and time-to-progression were compared at matched false-positive-rate (FPR), quantified using permutations of a separate test-retest cohort (360 tests, 30 eyes with glaucoma). BMs were compared to simple linear regression and Permutation-Analyses-of Pointwise-Linear-Regression. Differences in time-to-progression were tested using survival analysis. RESULTS: Censored models showed the smallest bias in the rate-of-progression. The three BMs performed very similarly in terms of HR and time-to-progression and always better than the other methods. The average reduction in time-to-progression was 37% with the BMs (P < 0.001) at 5% FPR. MAE for prediction was very similar among methods. CONCLUSIONS: Bayesian hierarchical models improved the detection of VF progression. Accounting for censoring improves the precision of the estimates, but minimal effect is provided by accounting for heteroskedasticity. TRANSLATIONAL RELEVANCE: These results are relevant for quantification of VF progression in practice and for clinical trials. The Association for Research in Vision and Ophthalmology 2021-10-05 /pmc/articles/PMC8496414/ /pubmed/34609479 http://dx.doi.org/10.1167/tvst.10.12.4 Text en Copyright 2021 The Authors https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License.
spellingShingle Article
Montesano, Giovanni
Garway-Heath, David F.
Ometto, Giovanni
Crabb, David P.
Hierarchical Censored Bayesian Analysis of Visual Field Progression
title Hierarchical Censored Bayesian Analysis of Visual Field Progression
title_full Hierarchical Censored Bayesian Analysis of Visual Field Progression
title_fullStr Hierarchical Censored Bayesian Analysis of Visual Field Progression
title_full_unstemmed Hierarchical Censored Bayesian Analysis of Visual Field Progression
title_short Hierarchical Censored Bayesian Analysis of Visual Field Progression
title_sort hierarchical censored bayesian analysis of visual field progression
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8496414/
https://www.ncbi.nlm.nih.gov/pubmed/34609479
http://dx.doi.org/10.1167/tvst.10.12.4
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