Cargando…

Detection of Spatiotemporal Clusters of COVID-19–Associated Symptoms and Prevention Using a Participatory Surveillance App: Protocol for the @choum Study

BACKGROUND: The early detection of clusters of infectious diseases such as the SARS-CoV-2–related COVID-19 disease can promote timely testing recommendation compliance and help to prevent disease outbreaks. Prior research revealed the potential of COVID-19 participatory syndromic surveillance system...

Descripción completa

Detalles Bibliográficos
Autores principales: De Ridder, David, Loizeau, Andrea Jutta, Sandoval, José Luis, Ehrler, Frédéric, Perrier, Myriam, Ritch, Albert, Violot, Guillemette, Santolini, Marc, Greshake Tzovaras, Bastian, Stringhini, Silvia, Kaiser, Laurent, Pradeau, Jean-François, Joost, Stéphane, Guessous, Idris
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8496683/
https://www.ncbi.nlm.nih.gov/pubmed/34449403
http://dx.doi.org/10.2196/30444
_version_ 1784579805416521728
author De Ridder, David
Loizeau, Andrea Jutta
Sandoval, José Luis
Ehrler, Frédéric
Perrier, Myriam
Ritch, Albert
Violot, Guillemette
Santolini, Marc
Greshake Tzovaras, Bastian
Stringhini, Silvia
Kaiser, Laurent
Pradeau, Jean-François
Joost, Stéphane
Guessous, Idris
author_facet De Ridder, David
Loizeau, Andrea Jutta
Sandoval, José Luis
Ehrler, Frédéric
Perrier, Myriam
Ritch, Albert
Violot, Guillemette
Santolini, Marc
Greshake Tzovaras, Bastian
Stringhini, Silvia
Kaiser, Laurent
Pradeau, Jean-François
Joost, Stéphane
Guessous, Idris
author_sort De Ridder, David
collection PubMed
description BACKGROUND: The early detection of clusters of infectious diseases such as the SARS-CoV-2–related COVID-19 disease can promote timely testing recommendation compliance and help to prevent disease outbreaks. Prior research revealed the potential of COVID-19 participatory syndromic surveillance systems to complement traditional surveillance systems. However, most existing systems did not integrate geographic information at a local scale, which could improve the management of the SARS-CoV-2 pandemic. OBJECTIVE: The aim of this study is to detect active and emerging spatiotemporal clusters of COVID-19–associated symptoms, and to examine (a posteriori) the association between the clusters’ characteristics and sociodemographic and environmental determinants. METHODS: This report presents the methodology and development of the @choum (English: “achoo”) study, evaluating an epidemiological digital surveillance tool to detect and prevent clusters of individuals (target sample size, N=5000), aged 18 years or above, with COVID-19–associated symptoms living and/or working in the canton of Geneva, Switzerland. The tool is a 5-minute survey integrated into a free and secure mobile app (CoronApp-HUG). Participants are enrolled through a comprehensive communication campaign conducted throughout the 12-month data collection phase. Participants register to the tool by providing electronic informed consent and nonsensitive information (gender, age, geographically masked addresses). Symptomatic participants can then report COVID-19–associated symptoms at their onset (eg, symptoms type, test date) by tapping on the @choum button. Those who have not yet been tested are offered the possibility to be informed on their cluster status (information returned by daily automated clustering analysis). At each participation step, participants are redirected to the official COVID-19 recommendations websites. Geospatial clustering analyses are performed using the modified space-time density-based spatial clustering of applications with noise (MST-DBSCAN) algorithm. RESULTS: The study began on September 1, 2020, and will be completed on February 28, 2022. Multiple tests performed at various time points throughout the 5-month preparation phase have helped to improve the tool’s user experience and the accuracy of the clustering analyses. A 1-month pilot study performed among 38 pharmacists working in 7 Geneva-based pharmacies confirmed the proper functioning of the tool. Since the tool’s launch to the entire population of Geneva on February 11, 2021, data are being collected and clusters are being carefully monitored. The primary study outcomes are expected to be published in mid-2022. CONCLUSIONS: The @choum study evaluates an innovative participatory epidemiological digital surveillance tool to detect and prevent clusters of COVID-19–associated symptoms. @choum collects precise geographic information while protecting the user’s privacy by using geomasking methods. By providing an evidence base to inform citizens and local authorities on areas potentially facing a high COVID-19 burden, the tool supports the targeted allocation of public health resources and promotes testing. INTERNATIONAL REGISTERED REPORT IDENTIFIER (IRRID): DERR1-10.2196/30444
format Online
Article
Text
id pubmed-8496683
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher JMIR Publications
record_format MEDLINE/PubMed
spelling pubmed-84966832021-11-16 Detection of Spatiotemporal Clusters of COVID-19–Associated Symptoms and Prevention Using a Participatory Surveillance App: Protocol for the @choum Study De Ridder, David Loizeau, Andrea Jutta Sandoval, José Luis Ehrler, Frédéric Perrier, Myriam Ritch, Albert Violot, Guillemette Santolini, Marc Greshake Tzovaras, Bastian Stringhini, Silvia Kaiser, Laurent Pradeau, Jean-François Joost, Stéphane Guessous, Idris JMIR Res Protoc Protocol BACKGROUND: The early detection of clusters of infectious diseases such as the SARS-CoV-2–related COVID-19 disease can promote timely testing recommendation compliance and help to prevent disease outbreaks. Prior research revealed the potential of COVID-19 participatory syndromic surveillance systems to complement traditional surveillance systems. However, most existing systems did not integrate geographic information at a local scale, which could improve the management of the SARS-CoV-2 pandemic. OBJECTIVE: The aim of this study is to detect active and emerging spatiotemporal clusters of COVID-19–associated symptoms, and to examine (a posteriori) the association between the clusters’ characteristics and sociodemographic and environmental determinants. METHODS: This report presents the methodology and development of the @choum (English: “achoo”) study, evaluating an epidemiological digital surveillance tool to detect and prevent clusters of individuals (target sample size, N=5000), aged 18 years or above, with COVID-19–associated symptoms living and/or working in the canton of Geneva, Switzerland. The tool is a 5-minute survey integrated into a free and secure mobile app (CoronApp-HUG). Participants are enrolled through a comprehensive communication campaign conducted throughout the 12-month data collection phase. Participants register to the tool by providing electronic informed consent and nonsensitive information (gender, age, geographically masked addresses). Symptomatic participants can then report COVID-19–associated symptoms at their onset (eg, symptoms type, test date) by tapping on the @choum button. Those who have not yet been tested are offered the possibility to be informed on their cluster status (information returned by daily automated clustering analysis). At each participation step, participants are redirected to the official COVID-19 recommendations websites. Geospatial clustering analyses are performed using the modified space-time density-based spatial clustering of applications with noise (MST-DBSCAN) algorithm. RESULTS: The study began on September 1, 2020, and will be completed on February 28, 2022. Multiple tests performed at various time points throughout the 5-month preparation phase have helped to improve the tool’s user experience and the accuracy of the clustering analyses. A 1-month pilot study performed among 38 pharmacists working in 7 Geneva-based pharmacies confirmed the proper functioning of the tool. Since the tool’s launch to the entire population of Geneva on February 11, 2021, data are being collected and clusters are being carefully monitored. The primary study outcomes are expected to be published in mid-2022. CONCLUSIONS: The @choum study evaluates an innovative participatory epidemiological digital surveillance tool to detect and prevent clusters of COVID-19–associated symptoms. @choum collects precise geographic information while protecting the user’s privacy by using geomasking methods. By providing an evidence base to inform citizens and local authorities on areas potentially facing a high COVID-19 burden, the tool supports the targeted allocation of public health resources and promotes testing. INTERNATIONAL REGISTERED REPORT IDENTIFIER (IRRID): DERR1-10.2196/30444 JMIR Publications 2021-10-06 /pmc/articles/PMC8496683/ /pubmed/34449403 http://dx.doi.org/10.2196/30444 Text en ©David De Ridder, Andrea Jutta Loizeau, José Luis Sandoval, Frédéric Ehrler, Myriam Perrier, Albert Ritch, Guillemette Violot, Marc Santolini, Bastian Greshake Tzovaras, Silvia Stringhini, Laurent Kaiser, Jean-François Pradeau, Stéphane Joost, Idris Guessous. Originally published in JMIR Research Protocols (https://www.researchprotocols.org), 06.10.2021. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Research Protocols, is properly cited. The complete bibliographic information, a link to the original publication on https://www.researchprotocols.org, as well as this copyright and license information must be included.
spellingShingle Protocol
De Ridder, David
Loizeau, Andrea Jutta
Sandoval, José Luis
Ehrler, Frédéric
Perrier, Myriam
Ritch, Albert
Violot, Guillemette
Santolini, Marc
Greshake Tzovaras, Bastian
Stringhini, Silvia
Kaiser, Laurent
Pradeau, Jean-François
Joost, Stéphane
Guessous, Idris
Detection of Spatiotemporal Clusters of COVID-19–Associated Symptoms and Prevention Using a Participatory Surveillance App: Protocol for the @choum Study
title Detection of Spatiotemporal Clusters of COVID-19–Associated Symptoms and Prevention Using a Participatory Surveillance App: Protocol for the @choum Study
title_full Detection of Spatiotemporal Clusters of COVID-19–Associated Symptoms and Prevention Using a Participatory Surveillance App: Protocol for the @choum Study
title_fullStr Detection of Spatiotemporal Clusters of COVID-19–Associated Symptoms and Prevention Using a Participatory Surveillance App: Protocol for the @choum Study
title_full_unstemmed Detection of Spatiotemporal Clusters of COVID-19–Associated Symptoms and Prevention Using a Participatory Surveillance App: Protocol for the @choum Study
title_short Detection of Spatiotemporal Clusters of COVID-19–Associated Symptoms and Prevention Using a Participatory Surveillance App: Protocol for the @choum Study
title_sort detection of spatiotemporal clusters of covid-19–associated symptoms and prevention using a participatory surveillance app: protocol for the @choum study
topic Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8496683/
https://www.ncbi.nlm.nih.gov/pubmed/34449403
http://dx.doi.org/10.2196/30444
work_keys_str_mv AT deridderdavid detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy
AT loizeauandreajutta detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy
AT sandovaljoseluis detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy
AT ehrlerfrederic detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy
AT perriermyriam detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy
AT ritchalbert detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy
AT violotguillemette detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy
AT santolinimarc detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy
AT greshaketzovarasbastian detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy
AT stringhinisilvia detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy
AT kaiserlaurent detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy
AT pradeaujeanfrancois detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy
AT jooststephane detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy
AT guessousidris detectionofspatiotemporalclustersofcovid19associatedsymptomsandpreventionusingaparticipatorysurveillanceappprotocolforthechoumstudy