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ATR-FTIR spectrum analysis of saliva samples from COVID-19 positive patients
The coronavirus disease 2019 (COVID-19) is the latest biological hazard for the novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Even though numerous diagnostic tests for SARS-CoV-2 have been proposed, new diagnosis strategies are being developed, looking for less expensive method...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8497525/ https://www.ncbi.nlm.nih.gov/pubmed/34620977 http://dx.doi.org/10.1038/s41598-021-99529-w |
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author | Martinez-Cuazitl, Adriana Vazquez-Zapien, Gustavo J. Sanchez-Brito, Miguel Limon-Pacheco, Jorge H. Guerrero-Ruiz, Melissa Garibay-Gonzalez, Francisco Delgado-Macuil, Raul J. de Jesus, Maria G. Garcia Corona-Perezgrovas, Miguel A. Pereyra-Talamantes, Armando Mata-Miranda, Monica M. |
author_facet | Martinez-Cuazitl, Adriana Vazquez-Zapien, Gustavo J. Sanchez-Brito, Miguel Limon-Pacheco, Jorge H. Guerrero-Ruiz, Melissa Garibay-Gonzalez, Francisco Delgado-Macuil, Raul J. de Jesus, Maria G. Garcia Corona-Perezgrovas, Miguel A. Pereyra-Talamantes, Armando Mata-Miranda, Monica M. |
author_sort | Martinez-Cuazitl, Adriana |
collection | PubMed |
description | The coronavirus disease 2019 (COVID-19) is the latest biological hazard for the novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Even though numerous diagnostic tests for SARS-CoV-2 have been proposed, new diagnosis strategies are being developed, looking for less expensive methods to be used as screening. This study aimed to establish salivary vibrational modes analyzed by attenuated total reflection-Fourier transform infrared (ATR-FTIR) spectroscopy to detect COVID-19 biological fingerprints that allow the discrimination between COVID-19 and healthy patients. Clinical dates, laboratories, and saliva samples of COVID-19 patients (N = 255) and healthy persons (N = 1209) were obtained and analyzed through ATR-FTIR spectroscopy. Then, a multivariate linear regression model (MLRM) was developed. The COVID-19 patients showed low SaO(2), cough, dyspnea, headache, and fever principally. C-reactive protein, lactate dehydrogenase, fibrinogen, d-dimer, and ferritin were the most important altered laboratory blood tests, which were increased. In addition, changes in amide I and immunoglobulin regions were evidenced in the FTIR spectra analysis, and the MLRM showed clear discrimination between both groups. Specific salivary vibrational modes employing ATR-FTIR spectroscopy were established; moreover, the COVID-19 biological fingerprint in saliva was characterized, allowing the COVID-19 detection using an MLRM, which could be helpful for the development of new diagnostic devices. |
format | Online Article Text |
id | pubmed-8497525 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-84975252021-10-12 ATR-FTIR spectrum analysis of saliva samples from COVID-19 positive patients Martinez-Cuazitl, Adriana Vazquez-Zapien, Gustavo J. Sanchez-Brito, Miguel Limon-Pacheco, Jorge H. Guerrero-Ruiz, Melissa Garibay-Gonzalez, Francisco Delgado-Macuil, Raul J. de Jesus, Maria G. Garcia Corona-Perezgrovas, Miguel A. Pereyra-Talamantes, Armando Mata-Miranda, Monica M. Sci Rep Article The coronavirus disease 2019 (COVID-19) is the latest biological hazard for the novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Even though numerous diagnostic tests for SARS-CoV-2 have been proposed, new diagnosis strategies are being developed, looking for less expensive methods to be used as screening. This study aimed to establish salivary vibrational modes analyzed by attenuated total reflection-Fourier transform infrared (ATR-FTIR) spectroscopy to detect COVID-19 biological fingerprints that allow the discrimination between COVID-19 and healthy patients. Clinical dates, laboratories, and saliva samples of COVID-19 patients (N = 255) and healthy persons (N = 1209) were obtained and analyzed through ATR-FTIR spectroscopy. Then, a multivariate linear regression model (MLRM) was developed. The COVID-19 patients showed low SaO(2), cough, dyspnea, headache, and fever principally. C-reactive protein, lactate dehydrogenase, fibrinogen, d-dimer, and ferritin were the most important altered laboratory blood tests, which were increased. In addition, changes in amide I and immunoglobulin regions were evidenced in the FTIR spectra analysis, and the MLRM showed clear discrimination between both groups. Specific salivary vibrational modes employing ATR-FTIR spectroscopy were established; moreover, the COVID-19 biological fingerprint in saliva was characterized, allowing the COVID-19 detection using an MLRM, which could be helpful for the development of new diagnostic devices. Nature Publishing Group UK 2021-10-07 /pmc/articles/PMC8497525/ /pubmed/34620977 http://dx.doi.org/10.1038/s41598-021-99529-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Martinez-Cuazitl, Adriana Vazquez-Zapien, Gustavo J. Sanchez-Brito, Miguel Limon-Pacheco, Jorge H. Guerrero-Ruiz, Melissa Garibay-Gonzalez, Francisco Delgado-Macuil, Raul J. de Jesus, Maria G. Garcia Corona-Perezgrovas, Miguel A. Pereyra-Talamantes, Armando Mata-Miranda, Monica M. ATR-FTIR spectrum analysis of saliva samples from COVID-19 positive patients |
title | ATR-FTIR spectrum analysis of saliva samples from COVID-19 positive patients |
title_full | ATR-FTIR spectrum analysis of saliva samples from COVID-19 positive patients |
title_fullStr | ATR-FTIR spectrum analysis of saliva samples from COVID-19 positive patients |
title_full_unstemmed | ATR-FTIR spectrum analysis of saliva samples from COVID-19 positive patients |
title_short | ATR-FTIR spectrum analysis of saliva samples from COVID-19 positive patients |
title_sort | atr-ftir spectrum analysis of saliva samples from covid-19 positive patients |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8497525/ https://www.ncbi.nlm.nih.gov/pubmed/34620977 http://dx.doi.org/10.1038/s41598-021-99529-w |
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