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A bioinspired neural architecture search based convolutional neural network for breast cancer detection using histopathology images
The design of neural architecture to address the challenge of detecting abnormalities in histopathology images can leverage the gains made in the field of neural architecture search (NAS). The NAS model consists of a search space, search strategy and evaluation strategy. The approach supports the au...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8497552/ https://www.ncbi.nlm.nih.gov/pubmed/34620891 http://dx.doi.org/10.1038/s41598-021-98978-7 |
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author | Oyelade, Olaide N. Ezugwu, Absalom E. |
author_facet | Oyelade, Olaide N. Ezugwu, Absalom E. |
author_sort | Oyelade, Olaide N. |
collection | PubMed |
description | The design of neural architecture to address the challenge of detecting abnormalities in histopathology images can leverage the gains made in the field of neural architecture search (NAS). The NAS model consists of a search space, search strategy and evaluation strategy. The approach supports the automation of deep learning (DL) based networks such as convolutional neural networks (CNN). Automating the process of CNN architecture engineering using this approach allows for finding the best performing network for learning classification problems in specific domains and datasets. However, the engineering process of NAS is often limited by the potential solutions in search space and the search strategy. This problem often narrows the possibility of obtaining best performing networks for challenging tasks such as the classification of breast cancer in digital histopathological samples. This study proposes a NAS model with a novel search space initialization algorithm and a new search strategy. We designed a block-based stochastic categorical-to-binary (BSCB) algorithm for generating potential CNN solutions into the search space. Also, we applied and investigated the performance of a new bioinspired optimization algorithm, namely the Ebola optimization search algorithm (EOSA), for the search strategy. The evaluation strategy was achieved through computation of loss function, architectural latency and accuracy. The results obtained using images from the BACH and BreakHis databases showed that our approach obtained best performing architectures with the top-5 of the architectures yielding a significant detection rate. The top-1 CNN architecture demonstrated a state-of-the-art performance of base on classification accuracy. The NAS strategy applied in this study and the resulting candidate architecture provides researchers with the most appropriate or suitable network configuration for using digital histopathology. |
format | Online Article Text |
id | pubmed-8497552 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-84975522021-10-12 A bioinspired neural architecture search based convolutional neural network for breast cancer detection using histopathology images Oyelade, Olaide N. Ezugwu, Absalom E. Sci Rep Article The design of neural architecture to address the challenge of detecting abnormalities in histopathology images can leverage the gains made in the field of neural architecture search (NAS). The NAS model consists of a search space, search strategy and evaluation strategy. The approach supports the automation of deep learning (DL) based networks such as convolutional neural networks (CNN). Automating the process of CNN architecture engineering using this approach allows for finding the best performing network for learning classification problems in specific domains and datasets. However, the engineering process of NAS is often limited by the potential solutions in search space and the search strategy. This problem often narrows the possibility of obtaining best performing networks for challenging tasks such as the classification of breast cancer in digital histopathological samples. This study proposes a NAS model with a novel search space initialization algorithm and a new search strategy. We designed a block-based stochastic categorical-to-binary (BSCB) algorithm for generating potential CNN solutions into the search space. Also, we applied and investigated the performance of a new bioinspired optimization algorithm, namely the Ebola optimization search algorithm (EOSA), for the search strategy. The evaluation strategy was achieved through computation of loss function, architectural latency and accuracy. The results obtained using images from the BACH and BreakHis databases showed that our approach obtained best performing architectures with the top-5 of the architectures yielding a significant detection rate. The top-1 CNN architecture demonstrated a state-of-the-art performance of base on classification accuracy. The NAS strategy applied in this study and the resulting candidate architecture provides researchers with the most appropriate or suitable network configuration for using digital histopathology. Nature Publishing Group UK 2021-10-07 /pmc/articles/PMC8497552/ /pubmed/34620891 http://dx.doi.org/10.1038/s41598-021-98978-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Oyelade, Olaide N. Ezugwu, Absalom E. A bioinspired neural architecture search based convolutional neural network for breast cancer detection using histopathology images |
title | A bioinspired neural architecture search based convolutional neural network for breast cancer detection using histopathology images |
title_full | A bioinspired neural architecture search based convolutional neural network for breast cancer detection using histopathology images |
title_fullStr | A bioinspired neural architecture search based convolutional neural network for breast cancer detection using histopathology images |
title_full_unstemmed | A bioinspired neural architecture search based convolutional neural network for breast cancer detection using histopathology images |
title_short | A bioinspired neural architecture search based convolutional neural network for breast cancer detection using histopathology images |
title_sort | bioinspired neural architecture search based convolutional neural network for breast cancer detection using histopathology images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8497552/ https://www.ncbi.nlm.nih.gov/pubmed/34620891 http://dx.doi.org/10.1038/s41598-021-98978-7 |
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