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Predicting cognitive impairment in outpatients with epilepsy using machine learning techniques
Many studies report predictions for cognitive function but there are few predictions in epileptic patients; therefore, we established a workflow to efficiently predict outcomes of both the Mini-Mental State Examination (MMSE) and Montreal Cognitive Assessment (MoCA) in outpatients with epilepsy. Dat...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8501137/ https://www.ncbi.nlm.nih.gov/pubmed/34625614 http://dx.doi.org/10.1038/s41598-021-99506-3 |
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author | Lin, Feng Han, Jiarui Xue, Teng Lin, Jilan Chen, Shenggen Zhu, Chaofeng Lin, Han Chen, Xianyang Lin, Wanhui Huang, Huapin |
author_facet | Lin, Feng Han, Jiarui Xue, Teng Lin, Jilan Chen, Shenggen Zhu, Chaofeng Lin, Han Chen, Xianyang Lin, Wanhui Huang, Huapin |
author_sort | Lin, Feng |
collection | PubMed |
description | Many studies report predictions for cognitive function but there are few predictions in epileptic patients; therefore, we established a workflow to efficiently predict outcomes of both the Mini-Mental State Examination (MMSE) and Montreal Cognitive Assessment (MoCA) in outpatients with epilepsy. Data from 441 outpatients with epilepsy were included; of these, 433 patients met the 12 clinical characteristic criteria and were divided into training (n = 304) and experimental (n = 129) groups. After descriptive statistics were analyzed, cross-validation was used to select the optimal model. The random forest (RF) algorithm was combined with the redundancy analysis (RDA) algorithm; then, optimal feature selection and resampling were carried out after removing linear redundancy information. The features that contributed more to multiple outcomes were selected. Finally, the external traceability of the model was evaluated using the follow-up data. The RF algorithm was the best prediction model for both MMSE and MoCA outcomes. Finally, seven markers were screened by overlapping the top ten important features for MMSE ranked by RF modeling, those ranked for MoCA ranked by RF modeling, and those for both assessments ranked by RDA. The optimal combination of features were namely, sex, age, age of onset, seizure frequency, brain MRI abnormalities, epileptiform discharge in EEG and usage of drugs. which was the most efficient in predicting outcomes of MMSE, MoCA, and both assessments. |
format | Online Article Text |
id | pubmed-8501137 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-85011372021-10-12 Predicting cognitive impairment in outpatients with epilepsy using machine learning techniques Lin, Feng Han, Jiarui Xue, Teng Lin, Jilan Chen, Shenggen Zhu, Chaofeng Lin, Han Chen, Xianyang Lin, Wanhui Huang, Huapin Sci Rep Article Many studies report predictions for cognitive function but there are few predictions in epileptic patients; therefore, we established a workflow to efficiently predict outcomes of both the Mini-Mental State Examination (MMSE) and Montreal Cognitive Assessment (MoCA) in outpatients with epilepsy. Data from 441 outpatients with epilepsy were included; of these, 433 patients met the 12 clinical characteristic criteria and were divided into training (n = 304) and experimental (n = 129) groups. After descriptive statistics were analyzed, cross-validation was used to select the optimal model. The random forest (RF) algorithm was combined with the redundancy analysis (RDA) algorithm; then, optimal feature selection and resampling were carried out after removing linear redundancy information. The features that contributed more to multiple outcomes were selected. Finally, the external traceability of the model was evaluated using the follow-up data. The RF algorithm was the best prediction model for both MMSE and MoCA outcomes. Finally, seven markers were screened by overlapping the top ten important features for MMSE ranked by RF modeling, those ranked for MoCA ranked by RF modeling, and those for both assessments ranked by RDA. The optimal combination of features were namely, sex, age, age of onset, seizure frequency, brain MRI abnormalities, epileptiform discharge in EEG and usage of drugs. which was the most efficient in predicting outcomes of MMSE, MoCA, and both assessments. Nature Publishing Group UK 2021-10-08 /pmc/articles/PMC8501137/ /pubmed/34625614 http://dx.doi.org/10.1038/s41598-021-99506-3 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Lin, Feng Han, Jiarui Xue, Teng Lin, Jilan Chen, Shenggen Zhu, Chaofeng Lin, Han Chen, Xianyang Lin, Wanhui Huang, Huapin Predicting cognitive impairment in outpatients with epilepsy using machine learning techniques |
title | Predicting cognitive impairment in outpatients with epilepsy using machine learning techniques |
title_full | Predicting cognitive impairment in outpatients with epilepsy using machine learning techniques |
title_fullStr | Predicting cognitive impairment in outpatients with epilepsy using machine learning techniques |
title_full_unstemmed | Predicting cognitive impairment in outpatients with epilepsy using machine learning techniques |
title_short | Predicting cognitive impairment in outpatients with epilepsy using machine learning techniques |
title_sort | predicting cognitive impairment in outpatients with epilepsy using machine learning techniques |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8501137/ https://www.ncbi.nlm.nih.gov/pubmed/34625614 http://dx.doi.org/10.1038/s41598-021-99506-3 |
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