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Novel anti-repression mechanism of H-NS proteins by a phage protein

H-NS family proteins, bacterial xenogeneic silencers, play central roles in genome organization and in the regulation of foreign genes. It is thought that gene repression is directly dependent on the DNA binding modes of H-NS family proteins. These proteins form lateral protofilaments along DNA. Und...

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Autores principales: Bdira, Fredj Ben, Erkelens, Amanda M, Qin, Liang, Volkov, Alexander N, Lippa, Andrew M, Bowring, Nicholas, Boyle, Aimee L, Ubbink, Marcellus, Dove, Simon L, Dame, Remus T
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8501957/
https://www.ncbi.nlm.nih.gov/pubmed/34520554
http://dx.doi.org/10.1093/nar/gkab793
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author Bdira, Fredj Ben
Erkelens, Amanda M
Qin, Liang
Volkov, Alexander N
Lippa, Andrew M
Bowring, Nicholas
Boyle, Aimee L
Ubbink, Marcellus
Dove, Simon L
Dame, Remus T
author_facet Bdira, Fredj Ben
Erkelens, Amanda M
Qin, Liang
Volkov, Alexander N
Lippa, Andrew M
Bowring, Nicholas
Boyle, Aimee L
Ubbink, Marcellus
Dove, Simon L
Dame, Remus T
author_sort Bdira, Fredj Ben
collection PubMed
description H-NS family proteins, bacterial xenogeneic silencers, play central roles in genome organization and in the regulation of foreign genes. It is thought that gene repression is directly dependent on the DNA binding modes of H-NS family proteins. These proteins form lateral protofilaments along DNA. Under specific environmental conditions they switch to bridging two DNA duplexes. This switching is a direct effect of environmental conditions on electrostatic interactions between the oppositely charged DNA binding and N-terminal domains of H-NS proteins. The Pseudomonas lytic phage LUZ24 encodes the protein gp4, which modulates the DNA binding and function of the H-NS family protein MvaT of Pseudomonas aeruginosa. However, the mechanism by which gp4 affects MvaT activity remains elusive. In this study, we show that gp4 specifically interferes with the formation and stability of the bridged MvaT–DNA complex. Structural investigations suggest that gp4 acts as an ‘electrostatic zipper’ between the oppositely charged domains of MvaT protomers, and stabilizes a structure resembling their ‘half-open’ conformation, resulting in relief of gene silencing and adverse effects on P. aeruginosa growth. The ability to control H-NS conformation and thereby its impact on global gene regulation and growth might open new avenues to fight Pseudomonas multidrug resistance.
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spelling pubmed-85019572021-10-12 Novel anti-repression mechanism of H-NS proteins by a phage protein Bdira, Fredj Ben Erkelens, Amanda M Qin, Liang Volkov, Alexander N Lippa, Andrew M Bowring, Nicholas Boyle, Aimee L Ubbink, Marcellus Dove, Simon L Dame, Remus T Nucleic Acids Res Structural Biology H-NS family proteins, bacterial xenogeneic silencers, play central roles in genome organization and in the regulation of foreign genes. It is thought that gene repression is directly dependent on the DNA binding modes of H-NS family proteins. These proteins form lateral protofilaments along DNA. Under specific environmental conditions they switch to bridging two DNA duplexes. This switching is a direct effect of environmental conditions on electrostatic interactions between the oppositely charged DNA binding and N-terminal domains of H-NS proteins. The Pseudomonas lytic phage LUZ24 encodes the protein gp4, which modulates the DNA binding and function of the H-NS family protein MvaT of Pseudomonas aeruginosa. However, the mechanism by which gp4 affects MvaT activity remains elusive. In this study, we show that gp4 specifically interferes with the formation and stability of the bridged MvaT–DNA complex. Structural investigations suggest that gp4 acts as an ‘electrostatic zipper’ between the oppositely charged domains of MvaT protomers, and stabilizes a structure resembling their ‘half-open’ conformation, resulting in relief of gene silencing and adverse effects on P. aeruginosa growth. The ability to control H-NS conformation and thereby its impact on global gene regulation and growth might open new avenues to fight Pseudomonas multidrug resistance. Oxford University Press 2021-09-14 /pmc/articles/PMC8501957/ /pubmed/34520554 http://dx.doi.org/10.1093/nar/gkab793 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Structural Biology
Bdira, Fredj Ben
Erkelens, Amanda M
Qin, Liang
Volkov, Alexander N
Lippa, Andrew M
Bowring, Nicholas
Boyle, Aimee L
Ubbink, Marcellus
Dove, Simon L
Dame, Remus T
Novel anti-repression mechanism of H-NS proteins by a phage protein
title Novel anti-repression mechanism of H-NS proteins by a phage protein
title_full Novel anti-repression mechanism of H-NS proteins by a phage protein
title_fullStr Novel anti-repression mechanism of H-NS proteins by a phage protein
title_full_unstemmed Novel anti-repression mechanism of H-NS proteins by a phage protein
title_short Novel anti-repression mechanism of H-NS proteins by a phage protein
title_sort novel anti-repression mechanism of h-ns proteins by a phage protein
topic Structural Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8501957/
https://www.ncbi.nlm.nih.gov/pubmed/34520554
http://dx.doi.org/10.1093/nar/gkab793
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