Cargando…
Analysis of saponins detoxification genes in Ilyonectria mors-panacis G3B inducing root rot of Panax notoginseng by RNA-Seq
Saponins are kinds of antifungal compounds produced by Panax notoginseng to resist invasion by pathogens. Ilyonectria mors-panacis G3B was the dominant pathogen inducing root rot of P. notoginseng, and the abilities to detoxify saponins were the key to infect P. notoginseng successfully. To research...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8502126/ https://www.ncbi.nlm.nih.gov/pubmed/34350471 http://dx.doi.org/10.1007/s00203-021-02502-4 |
_version_ | 1784580819987202048 |
---|---|
author | Zeng, Guohong Li, Jin Ma, Yuxiu Pu, Qian Xiao, Tian Yang, Ruihuan Hu, Xiufang |
author_facet | Zeng, Guohong Li, Jin Ma, Yuxiu Pu, Qian Xiao, Tian Yang, Ruihuan Hu, Xiufang |
author_sort | Zeng, Guohong |
collection | PubMed |
description | Saponins are kinds of antifungal compounds produced by Panax notoginseng to resist invasion by pathogens. Ilyonectria mors-panacis G3B was the dominant pathogen inducing root rot of P. notoginseng, and the abilities to detoxify saponins were the key to infect P. notoginseng successfully. To research the molecular mechanisms of detoxifying saponins in I. mors-panacis G3B, we used high-throughput RNA-Seq to identify 557 and 1519 differential expression genes (DEGs) in I. mors-panacis G3B with saponins treatments for 4H (Hours) and 12H (Hours) compared with no saponins treatments, respectively. Among these DEGs, we found 93 genes which were simultaneously highly expressed in I. mors-panacis G3B with saponins treatments for 4H and 12H, they mainly belong to genes encoding transporters, glycoside hydrolases, oxidation–reduction enzymes, transcription factors and so on. In addition, there were 21 putative PHI (Pathogen–Host Interaction) genes out of those 93 up-regulated genes. In this report, we analyzed virulence-associated genes in I. mors-panacis G3B which may be related to detoxifying saponins to infect P. notoginseng successfully. They provided an excellent starting point for in-depth study on pathogenicity of I. mors-panacis G3B and developed appropriate root rot disease management strategies in the future. |
format | Online Article Text |
id | pubmed-8502126 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-85021262021-10-22 Analysis of saponins detoxification genes in Ilyonectria mors-panacis G3B inducing root rot of Panax notoginseng by RNA-Seq Zeng, Guohong Li, Jin Ma, Yuxiu Pu, Qian Xiao, Tian Yang, Ruihuan Hu, Xiufang Arch Microbiol Original Paper Saponins are kinds of antifungal compounds produced by Panax notoginseng to resist invasion by pathogens. Ilyonectria mors-panacis G3B was the dominant pathogen inducing root rot of P. notoginseng, and the abilities to detoxify saponins were the key to infect P. notoginseng successfully. To research the molecular mechanisms of detoxifying saponins in I. mors-panacis G3B, we used high-throughput RNA-Seq to identify 557 and 1519 differential expression genes (DEGs) in I. mors-panacis G3B with saponins treatments for 4H (Hours) and 12H (Hours) compared with no saponins treatments, respectively. Among these DEGs, we found 93 genes which were simultaneously highly expressed in I. mors-panacis G3B with saponins treatments for 4H and 12H, they mainly belong to genes encoding transporters, glycoside hydrolases, oxidation–reduction enzymes, transcription factors and so on. In addition, there were 21 putative PHI (Pathogen–Host Interaction) genes out of those 93 up-regulated genes. In this report, we analyzed virulence-associated genes in I. mors-panacis G3B which may be related to detoxifying saponins to infect P. notoginseng successfully. They provided an excellent starting point for in-depth study on pathogenicity of I. mors-panacis G3B and developed appropriate root rot disease management strategies in the future. Springer Berlin Heidelberg 2021-08-04 2021 /pmc/articles/PMC8502126/ /pubmed/34350471 http://dx.doi.org/10.1007/s00203-021-02502-4 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Paper Zeng, Guohong Li, Jin Ma, Yuxiu Pu, Qian Xiao, Tian Yang, Ruihuan Hu, Xiufang Analysis of saponins detoxification genes in Ilyonectria mors-panacis G3B inducing root rot of Panax notoginseng by RNA-Seq |
title | Analysis of saponins detoxification genes in Ilyonectria mors-panacis G3B inducing root rot of Panax notoginseng by RNA-Seq |
title_full | Analysis of saponins detoxification genes in Ilyonectria mors-panacis G3B inducing root rot of Panax notoginseng by RNA-Seq |
title_fullStr | Analysis of saponins detoxification genes in Ilyonectria mors-panacis G3B inducing root rot of Panax notoginseng by RNA-Seq |
title_full_unstemmed | Analysis of saponins detoxification genes in Ilyonectria mors-panacis G3B inducing root rot of Panax notoginseng by RNA-Seq |
title_short | Analysis of saponins detoxification genes in Ilyonectria mors-panacis G3B inducing root rot of Panax notoginseng by RNA-Seq |
title_sort | analysis of saponins detoxification genes in ilyonectria mors-panacis g3b inducing root rot of panax notoginseng by rna-seq |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8502126/ https://www.ncbi.nlm.nih.gov/pubmed/34350471 http://dx.doi.org/10.1007/s00203-021-02502-4 |
work_keys_str_mv | AT zengguohong analysisofsaponinsdetoxificationgenesinilyonectriamorspanacisg3binducingrootrotofpanaxnotoginsengbyrnaseq AT lijin analysisofsaponinsdetoxificationgenesinilyonectriamorspanacisg3binducingrootrotofpanaxnotoginsengbyrnaseq AT mayuxiu analysisofsaponinsdetoxificationgenesinilyonectriamorspanacisg3binducingrootrotofpanaxnotoginsengbyrnaseq AT puqian analysisofsaponinsdetoxificationgenesinilyonectriamorspanacisg3binducingrootrotofpanaxnotoginsengbyrnaseq AT xiaotian analysisofsaponinsdetoxificationgenesinilyonectriamorspanacisg3binducingrootrotofpanaxnotoginsengbyrnaseq AT yangruihuan analysisofsaponinsdetoxificationgenesinilyonectriamorspanacisg3binducingrootrotofpanaxnotoginsengbyrnaseq AT huxiufang analysisofsaponinsdetoxificationgenesinilyonectriamorspanacisg3binducingrootrotofpanaxnotoginsengbyrnaseq |