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Effusibacillus dendaii sp. nov. isolated from farm soil

A Gram-positive, rod-shaped, spore-forming, thermophilic, and acidophilic bacterium, designated as strain skT53(T), was isolated from farm soil in Tokyo, Japan. Under aerobic conditions, the strain grew at 35–55 °C (optimum temperature 44–55 °C) and pH 4.0–6.0 (optimum pH 5.0). Phylogenetic analysis...

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Autores principales: Konishi, Tomoyuki, Tamura, Tomohiko, Tobita, Toru, Sakai, Saori, Matsuda, Namio, Kawasaki, Hisashi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8502169/
https://www.ncbi.nlm.nih.gov/pubmed/34235583
http://dx.doi.org/10.1007/s00203-021-02470-9
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author Konishi, Tomoyuki
Tamura, Tomohiko
Tobita, Toru
Sakai, Saori
Matsuda, Namio
Kawasaki, Hisashi
author_facet Konishi, Tomoyuki
Tamura, Tomohiko
Tobita, Toru
Sakai, Saori
Matsuda, Namio
Kawasaki, Hisashi
author_sort Konishi, Tomoyuki
collection PubMed
description A Gram-positive, rod-shaped, spore-forming, thermophilic, and acidophilic bacterium, designated as strain skT53(T), was isolated from farm soil in Tokyo, Japan. Under aerobic conditions, the strain grew at 35–55 °C (optimum temperature 44–55 °C) and pH 4.0–6.0 (optimum pH 5.0). Phylogenetic analysis of the 16S rRNA gene sequence showed that the isolate was moderately related to the type strain of Effusibacillus consociatus (94.3% similarity). The G + C content of the genomic DNA was 48.2 mol%, and MK-7 was the predominant respiratory quinone in the strain. The major fatty acids were anteiso-C(15:0), iso-C(15:0), and iso-C(16:0). Based on the phenotypic and chemotaxonomic characteristics, as well as 16S rRNA gene sequence similarity and whole genome analyses, strain skT53(T) represents a novel species in the genus Effusibacillus, for which the name Effusibacillus dendaii sp. nov. has been proposed. The type strain is skT53(T) (= NBRC 114101( T) = TBRC 11241( T)). SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00203-021-02470-9.
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spelling pubmed-85021692021-10-22 Effusibacillus dendaii sp. nov. isolated from farm soil Konishi, Tomoyuki Tamura, Tomohiko Tobita, Toru Sakai, Saori Matsuda, Namio Kawasaki, Hisashi Arch Microbiol Original Paper A Gram-positive, rod-shaped, spore-forming, thermophilic, and acidophilic bacterium, designated as strain skT53(T), was isolated from farm soil in Tokyo, Japan. Under aerobic conditions, the strain grew at 35–55 °C (optimum temperature 44–55 °C) and pH 4.0–6.0 (optimum pH 5.0). Phylogenetic analysis of the 16S rRNA gene sequence showed that the isolate was moderately related to the type strain of Effusibacillus consociatus (94.3% similarity). The G + C content of the genomic DNA was 48.2 mol%, and MK-7 was the predominant respiratory quinone in the strain. The major fatty acids were anteiso-C(15:0), iso-C(15:0), and iso-C(16:0). Based on the phenotypic and chemotaxonomic characteristics, as well as 16S rRNA gene sequence similarity and whole genome analyses, strain skT53(T) represents a novel species in the genus Effusibacillus, for which the name Effusibacillus dendaii sp. nov. has been proposed. The type strain is skT53(T) (= NBRC 114101( T) = TBRC 11241( T)). SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00203-021-02470-9. Springer Berlin Heidelberg 2021-07-07 2021 /pmc/articles/PMC8502169/ /pubmed/34235583 http://dx.doi.org/10.1007/s00203-021-02470-9 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Paper
Konishi, Tomoyuki
Tamura, Tomohiko
Tobita, Toru
Sakai, Saori
Matsuda, Namio
Kawasaki, Hisashi
Effusibacillus dendaii sp. nov. isolated from farm soil
title Effusibacillus dendaii sp. nov. isolated from farm soil
title_full Effusibacillus dendaii sp. nov. isolated from farm soil
title_fullStr Effusibacillus dendaii sp. nov. isolated from farm soil
title_full_unstemmed Effusibacillus dendaii sp. nov. isolated from farm soil
title_short Effusibacillus dendaii sp. nov. isolated from farm soil
title_sort effusibacillus dendaii sp. nov. isolated from farm soil
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8502169/
https://www.ncbi.nlm.nih.gov/pubmed/34235583
http://dx.doi.org/10.1007/s00203-021-02470-9
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