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Identification and validation of a pyroptosis-related prognostic signature for thyroid cancer

BACKGROUND: Pyroptosis is a form of programmed cell death triggered by inflammasomes. However, the roles of pyroptosis-related genes in thyroid cancer (THCA) remain still unclear. OBJECTIVE: This study aimed to construct a pyroptosis-related signature that could effectively predict THCA prognosis an...

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Autores principales: Wu, Pu, Shi, Jinyuan, Sun, Wei, Zhang, Hao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8502398/
https://www.ncbi.nlm.nih.gov/pubmed/34627252
http://dx.doi.org/10.1186/s12935-021-02231-0
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author Wu, Pu
Shi, Jinyuan
Sun, Wei
Zhang, Hao
author_facet Wu, Pu
Shi, Jinyuan
Sun, Wei
Zhang, Hao
author_sort Wu, Pu
collection PubMed
description BACKGROUND: Pyroptosis is a form of programmed cell death triggered by inflammasomes. However, the roles of pyroptosis-related genes in thyroid cancer (THCA) remain still unclear. OBJECTIVE: This study aimed to construct a pyroptosis-related signature that could effectively predict THCA prognosis and survival. METHODS: A LASSO Cox regression analysis was performed to build a prognostic model based on the expression profile of each pyroptosis-related gene. The predictive value of the prognostic model was validated in the internal cohort. RESULTS: A pyroptosis-related signature consisting of four genes was constructed to predict THCA prognosis and all patients were classified into high- and low-risk groups. Patients with a high-risk score had a poorer overall survival (OS) than those in the low-risk group. The area under the curve (AUC) of the receiver operator characteristic (ROC) curves assessed and verified the predictive performance of this signature. Multivariate analysis showed the risk score was an independent prognostic factor. Tumor immune cell infiltration and immune status were significantly higher in low-risk groups, which indicated a better response to immune checkpoint inhibitors (ICIs). Of the four pyroptosis-related genes in the prognostic signature, qRT-PCR detected three of them with significantly differential expression in THCA tissues. CONCLUSION: In summary, our pyroptosis-related risk signature may have an effective predictive and prognostic capability in THCA. Our results provide a potential foundation for future studies of the relationship between pyroptosis and the immunotherapy response. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12935-021-02231-0.
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spelling pubmed-85023982021-10-20 Identification and validation of a pyroptosis-related prognostic signature for thyroid cancer Wu, Pu Shi, Jinyuan Sun, Wei Zhang, Hao Cancer Cell Int Primary Research BACKGROUND: Pyroptosis is a form of programmed cell death triggered by inflammasomes. However, the roles of pyroptosis-related genes in thyroid cancer (THCA) remain still unclear. OBJECTIVE: This study aimed to construct a pyroptosis-related signature that could effectively predict THCA prognosis and survival. METHODS: A LASSO Cox regression analysis was performed to build a prognostic model based on the expression profile of each pyroptosis-related gene. The predictive value of the prognostic model was validated in the internal cohort. RESULTS: A pyroptosis-related signature consisting of four genes was constructed to predict THCA prognosis and all patients were classified into high- and low-risk groups. Patients with a high-risk score had a poorer overall survival (OS) than those in the low-risk group. The area under the curve (AUC) of the receiver operator characteristic (ROC) curves assessed and verified the predictive performance of this signature. Multivariate analysis showed the risk score was an independent prognostic factor. Tumor immune cell infiltration and immune status were significantly higher in low-risk groups, which indicated a better response to immune checkpoint inhibitors (ICIs). Of the four pyroptosis-related genes in the prognostic signature, qRT-PCR detected three of them with significantly differential expression in THCA tissues. CONCLUSION: In summary, our pyroptosis-related risk signature may have an effective predictive and prognostic capability in THCA. Our results provide a potential foundation for future studies of the relationship between pyroptosis and the immunotherapy response. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12935-021-02231-0. BioMed Central 2021-10-09 /pmc/articles/PMC8502398/ /pubmed/34627252 http://dx.doi.org/10.1186/s12935-021-02231-0 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Primary Research
Wu, Pu
Shi, Jinyuan
Sun, Wei
Zhang, Hao
Identification and validation of a pyroptosis-related prognostic signature for thyroid cancer
title Identification and validation of a pyroptosis-related prognostic signature for thyroid cancer
title_full Identification and validation of a pyroptosis-related prognostic signature for thyroid cancer
title_fullStr Identification and validation of a pyroptosis-related prognostic signature for thyroid cancer
title_full_unstemmed Identification and validation of a pyroptosis-related prognostic signature for thyroid cancer
title_short Identification and validation of a pyroptosis-related prognostic signature for thyroid cancer
title_sort identification and validation of a pyroptosis-related prognostic signature for thyroid cancer
topic Primary Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8502398/
https://www.ncbi.nlm.nih.gov/pubmed/34627252
http://dx.doi.org/10.1186/s12935-021-02231-0
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