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Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain
The aim of the work was to carry out the physiological, biochemical and genetic characterization of the Exiguobacterium alkaliphilum B-3531D strain. This strain is promising for use in the field of environmental biotechnology, since it has a pronounced ability to utilize crude oil and individual hyd...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8502702/ https://www.ncbi.nlm.nih.gov/pubmed/34660213 http://dx.doi.org/10.1016/j.btre.2021.e00678 |
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author | Delegan, Yanina Kocharovskaya, Yulia Bogun, Alexander Sizova, Angelika Solomentsev, Viktor Iminova, Leila Lyakhovchenko, Nikita Zinovieva, Alina Goyanov, Mikhail Solyanikova, Inna |
author_facet | Delegan, Yanina Kocharovskaya, Yulia Bogun, Alexander Sizova, Angelika Solomentsev, Viktor Iminova, Leila Lyakhovchenko, Nikita Zinovieva, Alina Goyanov, Mikhail Solyanikova, Inna |
author_sort | Delegan, Yanina |
collection | PubMed |
description | The aim of the work was to carry out the physiological, biochemical and genetic characterization of the Exiguobacterium alkaliphilum B-3531D strain. This strain is promising for use in the field of environmental biotechnology, since it has a pronounced ability to utilize crude oil and individual hydrocarbons in a wide temperature range. The genome of the strain was sequenced and completely assembled, it consists of a 2,903,369 bp circular chromosome and two circular plasmids, namely, pE73 (73,590 bp) and pE52 (52,125 bp). When cultivated in a mineral medium containing 2% of crude oil, the strain utilized 50% within 30 days of the experiment. In simulated seawater with the same oil content, the loss of hydrocarbons was 45% over the same period. For the first time we observed in an E. alkaliphilum strain the ability to efficiently utilize crude oil, including with an increased content of sodium chloride in the cultivation medium. |
format | Online Article Text |
id | pubmed-8502702 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-85027022021-10-15 Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain Delegan, Yanina Kocharovskaya, Yulia Bogun, Alexander Sizova, Angelika Solomentsev, Viktor Iminova, Leila Lyakhovchenko, Nikita Zinovieva, Alina Goyanov, Mikhail Solyanikova, Inna Biotechnol Rep (Amst) Short Communication The aim of the work was to carry out the physiological, biochemical and genetic characterization of the Exiguobacterium alkaliphilum B-3531D strain. This strain is promising for use in the field of environmental biotechnology, since it has a pronounced ability to utilize crude oil and individual hydrocarbons in a wide temperature range. The genome of the strain was sequenced and completely assembled, it consists of a 2,903,369 bp circular chromosome and two circular plasmids, namely, pE73 (73,590 bp) and pE52 (52,125 bp). When cultivated in a mineral medium containing 2% of crude oil, the strain utilized 50% within 30 days of the experiment. In simulated seawater with the same oil content, the loss of hydrocarbons was 45% over the same period. For the first time we observed in an E. alkaliphilum strain the ability to efficiently utilize crude oil, including with an increased content of sodium chloride in the cultivation medium. Elsevier 2021-09-28 /pmc/articles/PMC8502702/ /pubmed/34660213 http://dx.doi.org/10.1016/j.btre.2021.e00678 Text en © 2021 The Authors. Published by Elsevier B.V. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Short Communication Delegan, Yanina Kocharovskaya, Yulia Bogun, Alexander Sizova, Angelika Solomentsev, Viktor Iminova, Leila Lyakhovchenko, Nikita Zinovieva, Alina Goyanov, Mikhail Solyanikova, Inna Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain |
title | Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain |
title_full | Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain |
title_fullStr | Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain |
title_full_unstemmed | Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain |
title_short | Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain |
title_sort | characterization and genomic analysis of exiguobacterium alkaliphilum b-3531d, an efficient crude oil degrading strain |
topic | Short Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8502702/ https://www.ncbi.nlm.nih.gov/pubmed/34660213 http://dx.doi.org/10.1016/j.btre.2021.e00678 |
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