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Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain

The aim of the work was to carry out the physiological, biochemical and genetic characterization of the Exiguobacterium alkaliphilum B-3531D strain. This strain is promising for use in the field of environmental biotechnology, since it has a pronounced ability to utilize crude oil and individual hyd...

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Autores principales: Delegan, Yanina, Kocharovskaya, Yulia, Bogun, Alexander, Sizova, Angelika, Solomentsev, Viktor, Iminova, Leila, Lyakhovchenko, Nikita, Zinovieva, Alina, Goyanov, Mikhail, Solyanikova, Inna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8502702/
https://www.ncbi.nlm.nih.gov/pubmed/34660213
http://dx.doi.org/10.1016/j.btre.2021.e00678
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author Delegan, Yanina
Kocharovskaya, Yulia
Bogun, Alexander
Sizova, Angelika
Solomentsev, Viktor
Iminova, Leila
Lyakhovchenko, Nikita
Zinovieva, Alina
Goyanov, Mikhail
Solyanikova, Inna
author_facet Delegan, Yanina
Kocharovskaya, Yulia
Bogun, Alexander
Sizova, Angelika
Solomentsev, Viktor
Iminova, Leila
Lyakhovchenko, Nikita
Zinovieva, Alina
Goyanov, Mikhail
Solyanikova, Inna
author_sort Delegan, Yanina
collection PubMed
description The aim of the work was to carry out the physiological, biochemical and genetic characterization of the Exiguobacterium alkaliphilum B-3531D strain. This strain is promising for use in the field of environmental biotechnology, since it has a pronounced ability to utilize crude oil and individual hydrocarbons in a wide temperature range. The genome of the strain was sequenced and completely assembled, it consists of a 2,903,369 bp circular chromosome and two circular plasmids, namely, pE73 (73,590 bp) and pE52 (52,125 bp). When cultivated in a mineral medium containing 2% of crude oil, the strain utilized 50% within 30 days of the experiment. In simulated seawater with the same oil content, the loss of hydrocarbons was 45% over the same period. For the first time we observed in an E. alkaliphilum strain the ability to efficiently utilize crude oil, including with an increased content of sodium chloride in the cultivation medium.
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spelling pubmed-85027022021-10-15 Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain Delegan, Yanina Kocharovskaya, Yulia Bogun, Alexander Sizova, Angelika Solomentsev, Viktor Iminova, Leila Lyakhovchenko, Nikita Zinovieva, Alina Goyanov, Mikhail Solyanikova, Inna Biotechnol Rep (Amst) Short Communication The aim of the work was to carry out the physiological, biochemical and genetic characterization of the Exiguobacterium alkaliphilum B-3531D strain. This strain is promising for use in the field of environmental biotechnology, since it has a pronounced ability to utilize crude oil and individual hydrocarbons in a wide temperature range. The genome of the strain was sequenced and completely assembled, it consists of a 2,903,369 bp circular chromosome and two circular plasmids, namely, pE73 (73,590 bp) and pE52 (52,125 bp). When cultivated in a mineral medium containing 2% of crude oil, the strain utilized 50% within 30 days of the experiment. In simulated seawater with the same oil content, the loss of hydrocarbons was 45% over the same period. For the first time we observed in an E. alkaliphilum strain the ability to efficiently utilize crude oil, including with an increased content of sodium chloride in the cultivation medium. Elsevier 2021-09-28 /pmc/articles/PMC8502702/ /pubmed/34660213 http://dx.doi.org/10.1016/j.btre.2021.e00678 Text en © 2021 The Authors. Published by Elsevier B.V. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Short Communication
Delegan, Yanina
Kocharovskaya, Yulia
Bogun, Alexander
Sizova, Angelika
Solomentsev, Viktor
Iminova, Leila
Lyakhovchenko, Nikita
Zinovieva, Alina
Goyanov, Mikhail
Solyanikova, Inna
Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain
title Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain
title_full Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain
title_fullStr Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain
title_full_unstemmed Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain
title_short Characterization and genomic analysis of Exiguobacterium alkaliphilum B-3531D, an efficient crude oil degrading strain
title_sort characterization and genomic analysis of exiguobacterium alkaliphilum b-3531d, an efficient crude oil degrading strain
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8502702/
https://www.ncbi.nlm.nih.gov/pubmed/34660213
http://dx.doi.org/10.1016/j.btre.2021.e00678
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