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Data of RNA-seq transcriptomes in the brain associated with aggression in males of the fish Betta splendens
Siamese fighting fish Betta splendens are notorious for their aggressiveness and males of this fish have been widely used to study aggression. However, an understanding of brain transcriptome signature associated with aggression in the context of male-male interaction in this fish remains to be unde...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8503591/ https://www.ncbi.nlm.nih.gov/pubmed/34660862 http://dx.doi.org/10.1016/j.dib.2021.107448 |
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author | Vu, Trieu-Duc Iwasaki, Yuki Oshima, Kenshiro Chiu, Ming-Tzu Nikaido, Masato Okada, Norihiro |
author_facet | Vu, Trieu-Duc Iwasaki, Yuki Oshima, Kenshiro Chiu, Ming-Tzu Nikaido, Masato Okada, Norihiro |
author_sort | Vu, Trieu-Duc |
collection | PubMed |
description | Siamese fighting fish Betta splendens are notorious for their aggressiveness and males of this fish have been widely used to study aggression. However, an understanding of brain transcriptome signature associated with aggression in the context of male-male interaction in this fish remains to be understood. Herein, RNA-Seq transcriptome data from 37 brains samples collected at different fighting stages are described. These brain samples were collected before fighting (B), during fighting (D20 and D60), and after fighting (A0 and A30). The raw data were analyzed for differential gene expression using edgeR package in R. A criterion of FDR cut-off ≤ 0.05 and an absolute fold change (FC) of 0 or greater were used to identify top upregulated and downregulated genes in fighting groups (D20, D60, A0, and A30) relative to non-fighting group (B). The data presented hereafter enable fundamental studies on genes and molecular events mediating aggressive behavior in this fish and will lay a valuable foundation for future research on the aggression of vertebrates. |
format | Online Article Text |
id | pubmed-8503591 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-85035912021-10-15 Data of RNA-seq transcriptomes in the brain associated with aggression in males of the fish Betta splendens Vu, Trieu-Duc Iwasaki, Yuki Oshima, Kenshiro Chiu, Ming-Tzu Nikaido, Masato Okada, Norihiro Data Brief Data Article Siamese fighting fish Betta splendens are notorious for their aggressiveness and males of this fish have been widely used to study aggression. However, an understanding of brain transcriptome signature associated with aggression in the context of male-male interaction in this fish remains to be understood. Herein, RNA-Seq transcriptome data from 37 brains samples collected at different fighting stages are described. These brain samples were collected before fighting (B), during fighting (D20 and D60), and after fighting (A0 and A30). The raw data were analyzed for differential gene expression using edgeR package in R. A criterion of FDR cut-off ≤ 0.05 and an absolute fold change (FC) of 0 or greater were used to identify top upregulated and downregulated genes in fighting groups (D20, D60, A0, and A30) relative to non-fighting group (B). The data presented hereafter enable fundamental studies on genes and molecular events mediating aggressive behavior in this fish and will lay a valuable foundation for future research on the aggression of vertebrates. Elsevier 2021-10-02 /pmc/articles/PMC8503591/ /pubmed/34660862 http://dx.doi.org/10.1016/j.dib.2021.107448 Text en © 2021 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Vu, Trieu-Duc Iwasaki, Yuki Oshima, Kenshiro Chiu, Ming-Tzu Nikaido, Masato Okada, Norihiro Data of RNA-seq transcriptomes in the brain associated with aggression in males of the fish Betta splendens |
title | Data of RNA-seq transcriptomes in the brain associated with aggression in males of the fish Betta splendens |
title_full | Data of RNA-seq transcriptomes in the brain associated with aggression in males of the fish Betta splendens |
title_fullStr | Data of RNA-seq transcriptomes in the brain associated with aggression in males of the fish Betta splendens |
title_full_unstemmed | Data of RNA-seq transcriptomes in the brain associated with aggression in males of the fish Betta splendens |
title_short | Data of RNA-seq transcriptomes in the brain associated with aggression in males of the fish Betta splendens |
title_sort | data of rna-seq transcriptomes in the brain associated with aggression in males of the fish betta splendens |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8503591/ https://www.ncbi.nlm.nih.gov/pubmed/34660862 http://dx.doi.org/10.1016/j.dib.2021.107448 |
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