SpacePHARER: sensitive identification of phages from CRISPR spacers in prokaryotic hosts

SUMMARY: SpacePHARER (CRISPR Spacer Phage–Host Pair Finder) is a sensitive and fast tool for de novo prediction of phage–host relationships via identifying phage genomes that match CRISPR spacers in genomic or metagenomic data. SpacePHARER gains sensitivity by comparing spacers and phages at the pro...

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Detalles Bibliográficos
Autores principales: Zhang, Ruoshi, Mirdita, Milot, Levy Karin, Eli, Norroy, Clovis, Galiez, Clovis, Söding, Johannes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8504623/
https://www.ncbi.nlm.nih.gov/pubmed/33792634
http://dx.doi.org/10.1093/bioinformatics/btab222

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8504623/
https://www.ncbi.nlm.nih.gov/pubmed/33792634
http://dx.doi.org/10.1093/bioinformatics/btab222

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