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Development of Rapid and Visual Nucleic Acid Detection Methods towards Four Serotypes of Human Adenovirus Species B Based on RPA-LF Test

OBJECTIVES: Human adenoviruses (HAdV) are classified as 7 HAdV species, and some serotypes in species B like HAdV 3, HAdV 7, HAdV 21, and HAdV 55 caused severe symptoms, even fatalities. Patients may be misdiagnosed and inadequately treated without reliable and practical methods for HAdV serotyping....

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Autores principales: Qi, Yong, Li, Wei, Li, Xiaoling, Shen, Wanpeng, Zhang, Jinhai, Li, Jiameng, Lv, Ruichen, Lu, Nianhong, Zong, Liqiang, Zhuang, Susu, Gui, Qiyuan, Zhou, Dongming, Li, Jing, Xu, Yingjia, Shen, Hongbing, Li, Yuexi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8505065/
https://www.ncbi.nlm.nih.gov/pubmed/34646888
http://dx.doi.org/10.1155/2021/9957747
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author Qi, Yong
Li, Wei
Li, Xiaoling
Shen, Wanpeng
Zhang, Jinhai
Li, Jiameng
Lv, Ruichen
Lu, Nianhong
Zong, Liqiang
Zhuang, Susu
Gui, Qiyuan
Zhou, Dongming
Li, Jing
Xu, Yingjia
Shen, Hongbing
Li, Yuexi
author_facet Qi, Yong
Li, Wei
Li, Xiaoling
Shen, Wanpeng
Zhang, Jinhai
Li, Jiameng
Lv, Ruichen
Lu, Nianhong
Zong, Liqiang
Zhuang, Susu
Gui, Qiyuan
Zhou, Dongming
Li, Jing
Xu, Yingjia
Shen, Hongbing
Li, Yuexi
author_sort Qi, Yong
collection PubMed
description OBJECTIVES: Human adenoviruses (HAdV) are classified as 7 HAdV species, and some serotypes in species B like HAdV 3, HAdV 7, HAdV 21, and HAdV 55 caused severe symptoms, even fatalities. Patients may be misdiagnosed and inadequately treated without reliable and practical methods for HAdV serotyping. Developing rapid, sensitive, and specific diagnostic methods for HAdV is critical. METHODS: Detection methods were established based on a recombinase polymerase amplification (RPA) assay and lateral flow (LF) test. Specific target sequence was screened, targeting which, primers and probes were designed, synthesized, and screened for establishing assay with high amplification efficiency. Primer or probe concentrations and amplification time were optimized. Detection limit, sensitivity, and specificity were evaluated. Results and Conclusions. Simple, sensitive, and specific RPA-LF methods for detection of four serotypes of HAdV together or separately were established, which had detection limits of 10 to 280 copies/reaction comparable to real-time PCR without recognizing other pathogens. The sensitivity and specificity were >92% and >98%, respectively, evaluated by limited clinical samples. The detection can be completed in 25 min without requirement of any instrument except a constant temperature equipment, showing superior detection performance and promising for a wide use in the field and resource-limited area.
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spelling pubmed-85050652021-10-12 Development of Rapid and Visual Nucleic Acid Detection Methods towards Four Serotypes of Human Adenovirus Species B Based on RPA-LF Test Qi, Yong Li, Wei Li, Xiaoling Shen, Wanpeng Zhang, Jinhai Li, Jiameng Lv, Ruichen Lu, Nianhong Zong, Liqiang Zhuang, Susu Gui, Qiyuan Zhou, Dongming Li, Jing Xu, Yingjia Shen, Hongbing Li, Yuexi Biomed Res Int Research Article OBJECTIVES: Human adenoviruses (HAdV) are classified as 7 HAdV species, and some serotypes in species B like HAdV 3, HAdV 7, HAdV 21, and HAdV 55 caused severe symptoms, even fatalities. Patients may be misdiagnosed and inadequately treated without reliable and practical methods for HAdV serotyping. Developing rapid, sensitive, and specific diagnostic methods for HAdV is critical. METHODS: Detection methods were established based on a recombinase polymerase amplification (RPA) assay and lateral flow (LF) test. Specific target sequence was screened, targeting which, primers and probes were designed, synthesized, and screened for establishing assay with high amplification efficiency. Primer or probe concentrations and amplification time were optimized. Detection limit, sensitivity, and specificity were evaluated. Results and Conclusions. Simple, sensitive, and specific RPA-LF methods for detection of four serotypes of HAdV together or separately were established, which had detection limits of 10 to 280 copies/reaction comparable to real-time PCR without recognizing other pathogens. The sensitivity and specificity were >92% and >98%, respectively, evaluated by limited clinical samples. The detection can be completed in 25 min without requirement of any instrument except a constant temperature equipment, showing superior detection performance and promising for a wide use in the field and resource-limited area. Hindawi 2021-10-04 /pmc/articles/PMC8505065/ /pubmed/34646888 http://dx.doi.org/10.1155/2021/9957747 Text en Copyright © 2021 Yong Qi et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Qi, Yong
Li, Wei
Li, Xiaoling
Shen, Wanpeng
Zhang, Jinhai
Li, Jiameng
Lv, Ruichen
Lu, Nianhong
Zong, Liqiang
Zhuang, Susu
Gui, Qiyuan
Zhou, Dongming
Li, Jing
Xu, Yingjia
Shen, Hongbing
Li, Yuexi
Development of Rapid and Visual Nucleic Acid Detection Methods towards Four Serotypes of Human Adenovirus Species B Based on RPA-LF Test
title Development of Rapid and Visual Nucleic Acid Detection Methods towards Four Serotypes of Human Adenovirus Species B Based on RPA-LF Test
title_full Development of Rapid and Visual Nucleic Acid Detection Methods towards Four Serotypes of Human Adenovirus Species B Based on RPA-LF Test
title_fullStr Development of Rapid and Visual Nucleic Acid Detection Methods towards Four Serotypes of Human Adenovirus Species B Based on RPA-LF Test
title_full_unstemmed Development of Rapid and Visual Nucleic Acid Detection Methods towards Four Serotypes of Human Adenovirus Species B Based on RPA-LF Test
title_short Development of Rapid and Visual Nucleic Acid Detection Methods towards Four Serotypes of Human Adenovirus Species B Based on RPA-LF Test
title_sort development of rapid and visual nucleic acid detection methods towards four serotypes of human adenovirus species b based on rpa-lf test
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8505065/
https://www.ncbi.nlm.nih.gov/pubmed/34646888
http://dx.doi.org/10.1155/2021/9957747
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