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A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry
Cancer registries collect multisource data and provide valuable information that can lead to unique research opportunities. In the Netherlands, a registry and model-based approach (MBA) are used for the selection of patients that are eligible for proton therapy. We collected baseline characteristics...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8505268/ https://www.ncbi.nlm.nih.gov/pubmed/34667884 http://dx.doi.org/10.1016/j.ctro.2021.10.001 |
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author | Sloep, Matthijs Kalendralis, Petros Choudhury, Ananya Seyben, Lerau Snel, Jasper George, Nibin Moni Veening, Martijn Langendijk, Johannes A. Dekker, Andre van Soest, Johan Fijten, Rianne |
author_facet | Sloep, Matthijs Kalendralis, Petros Choudhury, Ananya Seyben, Lerau Snel, Jasper George, Nibin Moni Veening, Martijn Langendijk, Johannes A. Dekker, Andre van Soest, Johan Fijten, Rianne |
author_sort | Sloep, Matthijs |
collection | PubMed |
description | Cancer registries collect multisource data and provide valuable information that can lead to unique research opportunities. In the Netherlands, a registry and model-based approach (MBA) are used for the selection of patients that are eligible for proton therapy. We collected baseline characteristics including demographic, clinical, tumour and treatment information. These data were transformed into a machine readable format using the FAIR (Findable, Accessible, Interoperable, Reusable) data principles and resulted in a knowledge graph with baseline characteristics of proton therapy patients. With this approach, we enable the possibility of linking external data sources and optimal flexibility to easily adapt the data structure of the existing knowledge graph to the needs of the clinic. |
format | Online Article Text |
id | pubmed-8505268 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-85052682021-10-18 A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry Sloep, Matthijs Kalendralis, Petros Choudhury, Ananya Seyben, Lerau Snel, Jasper George, Nibin Moni Veening, Martijn Langendijk, Johannes A. Dekker, Andre van Soest, Johan Fijten, Rianne Clin Transl Radiat Oncol Article Cancer registries collect multisource data and provide valuable information that can lead to unique research opportunities. In the Netherlands, a registry and model-based approach (MBA) are used for the selection of patients that are eligible for proton therapy. We collected baseline characteristics including demographic, clinical, tumour and treatment information. These data were transformed into a machine readable format using the FAIR (Findable, Accessible, Interoperable, Reusable) data principles and resulted in a knowledge graph with baseline characteristics of proton therapy patients. With this approach, we enable the possibility of linking external data sources and optimal flexibility to easily adapt the data structure of the existing knowledge graph to the needs of the clinic. Elsevier 2021-10-07 /pmc/articles/PMC8505268/ /pubmed/34667884 http://dx.doi.org/10.1016/j.ctro.2021.10.001 Text en © 2021 Published by Elsevier B.V. on behalf of European Society for Radiotherapy and Oncology. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Sloep, Matthijs Kalendralis, Petros Choudhury, Ananya Seyben, Lerau Snel, Jasper George, Nibin Moni Veening, Martijn Langendijk, Johannes A. Dekker, Andre van Soest, Johan Fijten, Rianne A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry |
title | A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry |
title_full | A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry |
title_fullStr | A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry |
title_full_unstemmed | A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry |
title_short | A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry |
title_sort | knowledge graph representation of baseline characteristics for the dutch proton therapy research registry |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8505268/ https://www.ncbi.nlm.nih.gov/pubmed/34667884 http://dx.doi.org/10.1016/j.ctro.2021.10.001 |
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