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A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry

Cancer registries collect multisource data and provide valuable information that can lead to unique research opportunities. In the Netherlands, a registry and model-based approach (MBA) are used for the selection of patients that are eligible for proton therapy. We collected baseline characteristics...

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Autores principales: Sloep, Matthijs, Kalendralis, Petros, Choudhury, Ananya, Seyben, Lerau, Snel, Jasper, George, Nibin Moni, Veening, Martijn, Langendijk, Johannes A., Dekker, Andre, van Soest, Johan, Fijten, Rianne
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8505268/
https://www.ncbi.nlm.nih.gov/pubmed/34667884
http://dx.doi.org/10.1016/j.ctro.2021.10.001
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author Sloep, Matthijs
Kalendralis, Petros
Choudhury, Ananya
Seyben, Lerau
Snel, Jasper
George, Nibin Moni
Veening, Martijn
Langendijk, Johannes A.
Dekker, Andre
van Soest, Johan
Fijten, Rianne
author_facet Sloep, Matthijs
Kalendralis, Petros
Choudhury, Ananya
Seyben, Lerau
Snel, Jasper
George, Nibin Moni
Veening, Martijn
Langendijk, Johannes A.
Dekker, Andre
van Soest, Johan
Fijten, Rianne
author_sort Sloep, Matthijs
collection PubMed
description Cancer registries collect multisource data and provide valuable information that can lead to unique research opportunities. In the Netherlands, a registry and model-based approach (MBA) are used for the selection of patients that are eligible for proton therapy. We collected baseline characteristics including demographic, clinical, tumour and treatment information. These data were transformed into a machine readable format using the FAIR (Findable, Accessible, Interoperable, Reusable) data principles and resulted in a knowledge graph with baseline characteristics of proton therapy patients. With this approach, we enable the possibility of linking external data sources and optimal flexibility to easily adapt the data structure of the existing knowledge graph to the needs of the clinic.
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spelling pubmed-85052682021-10-18 A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry Sloep, Matthijs Kalendralis, Petros Choudhury, Ananya Seyben, Lerau Snel, Jasper George, Nibin Moni Veening, Martijn Langendijk, Johannes A. Dekker, Andre van Soest, Johan Fijten, Rianne Clin Transl Radiat Oncol Article Cancer registries collect multisource data and provide valuable information that can lead to unique research opportunities. In the Netherlands, a registry and model-based approach (MBA) are used for the selection of patients that are eligible for proton therapy. We collected baseline characteristics including demographic, clinical, tumour and treatment information. These data were transformed into a machine readable format using the FAIR (Findable, Accessible, Interoperable, Reusable) data principles and resulted in a knowledge graph with baseline characteristics of proton therapy patients. With this approach, we enable the possibility of linking external data sources and optimal flexibility to easily adapt the data structure of the existing knowledge graph to the needs of the clinic. Elsevier 2021-10-07 /pmc/articles/PMC8505268/ /pubmed/34667884 http://dx.doi.org/10.1016/j.ctro.2021.10.001 Text en © 2021 Published by Elsevier B.V. on behalf of European Society for Radiotherapy and Oncology. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Sloep, Matthijs
Kalendralis, Petros
Choudhury, Ananya
Seyben, Lerau
Snel, Jasper
George, Nibin Moni
Veening, Martijn
Langendijk, Johannes A.
Dekker, Andre
van Soest, Johan
Fijten, Rianne
A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry
title A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry
title_full A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry
title_fullStr A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry
title_full_unstemmed A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry
title_short A knowledge graph representation of baseline characteristics for the Dutch proton therapy research registry
title_sort knowledge graph representation of baseline characteristics for the dutch proton therapy research registry
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8505268/
https://www.ncbi.nlm.nih.gov/pubmed/34667884
http://dx.doi.org/10.1016/j.ctro.2021.10.001
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