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Predicting bloodstream infection outcome using machine learning

Bloodstream infections (BSI) are a main cause of infectious disease morbidity and mortality worldwide. Early prediction of BSI patients at high risk of poor outcomes is important for earlier decision making and effective patient stratification. We developed electronic medical record-based machine le...

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Autores principales: Zoabi, Yazeed, Kehat, Orli, Lahav, Dan, Weiss-Meilik, Ahuva, Adler, Amos, Shomron, Noam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8505419/
https://www.ncbi.nlm.nih.gov/pubmed/34635696
http://dx.doi.org/10.1038/s41598-021-99105-2
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author Zoabi, Yazeed
Kehat, Orli
Lahav, Dan
Weiss-Meilik, Ahuva
Adler, Amos
Shomron, Noam
author_facet Zoabi, Yazeed
Kehat, Orli
Lahav, Dan
Weiss-Meilik, Ahuva
Adler, Amos
Shomron, Noam
author_sort Zoabi, Yazeed
collection PubMed
description Bloodstream infections (BSI) are a main cause of infectious disease morbidity and mortality worldwide. Early prediction of BSI patients at high risk of poor outcomes is important for earlier decision making and effective patient stratification. We developed electronic medical record-based machine learning models that predict patient outcomes of BSI. The area under the receiver-operating characteristics curve was 0.82 for a full featured inclusive model, and 0.81 for a compact model using only 25 features. Our models were trained using electronic medical records that include demographics, blood tests, and the medical and diagnosis history of 7889 hospitalized patients diagnosed with BSI. Among the implications of this work is implementation of the models as a basis for selective rapid microbiological identification, toward earlier administration of appropriate antibiotic therapy. Additionally, our models may help reduce the development of BSI and its associated adverse health outcomes and complications.
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spelling pubmed-85054192021-10-13 Predicting bloodstream infection outcome using machine learning Zoabi, Yazeed Kehat, Orli Lahav, Dan Weiss-Meilik, Ahuva Adler, Amos Shomron, Noam Sci Rep Article Bloodstream infections (BSI) are a main cause of infectious disease morbidity and mortality worldwide. Early prediction of BSI patients at high risk of poor outcomes is important for earlier decision making and effective patient stratification. We developed electronic medical record-based machine learning models that predict patient outcomes of BSI. The area under the receiver-operating characteristics curve was 0.82 for a full featured inclusive model, and 0.81 for a compact model using only 25 features. Our models were trained using electronic medical records that include demographics, blood tests, and the medical and diagnosis history of 7889 hospitalized patients diagnosed with BSI. Among the implications of this work is implementation of the models as a basis for selective rapid microbiological identification, toward earlier administration of appropriate antibiotic therapy. Additionally, our models may help reduce the development of BSI and its associated adverse health outcomes and complications. Nature Publishing Group UK 2021-10-11 /pmc/articles/PMC8505419/ /pubmed/34635696 http://dx.doi.org/10.1038/s41598-021-99105-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Zoabi, Yazeed
Kehat, Orli
Lahav, Dan
Weiss-Meilik, Ahuva
Adler, Amos
Shomron, Noam
Predicting bloodstream infection outcome using machine learning
title Predicting bloodstream infection outcome using machine learning
title_full Predicting bloodstream infection outcome using machine learning
title_fullStr Predicting bloodstream infection outcome using machine learning
title_full_unstemmed Predicting bloodstream infection outcome using machine learning
title_short Predicting bloodstream infection outcome using machine learning
title_sort predicting bloodstream infection outcome using machine learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8505419/
https://www.ncbi.nlm.nih.gov/pubmed/34635696
http://dx.doi.org/10.1038/s41598-021-99105-2
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