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Predicting bloodstream infection outcome using machine learning
Bloodstream infections (BSI) are a main cause of infectious disease morbidity and mortality worldwide. Early prediction of BSI patients at high risk of poor outcomes is important for earlier decision making and effective patient stratification. We developed electronic medical record-based machine le...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8505419/ https://www.ncbi.nlm.nih.gov/pubmed/34635696 http://dx.doi.org/10.1038/s41598-021-99105-2 |
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author | Zoabi, Yazeed Kehat, Orli Lahav, Dan Weiss-Meilik, Ahuva Adler, Amos Shomron, Noam |
author_facet | Zoabi, Yazeed Kehat, Orli Lahav, Dan Weiss-Meilik, Ahuva Adler, Amos Shomron, Noam |
author_sort | Zoabi, Yazeed |
collection | PubMed |
description | Bloodstream infections (BSI) are a main cause of infectious disease morbidity and mortality worldwide. Early prediction of BSI patients at high risk of poor outcomes is important for earlier decision making and effective patient stratification. We developed electronic medical record-based machine learning models that predict patient outcomes of BSI. The area under the receiver-operating characteristics curve was 0.82 for a full featured inclusive model, and 0.81 for a compact model using only 25 features. Our models were trained using electronic medical records that include demographics, blood tests, and the medical and diagnosis history of 7889 hospitalized patients diagnosed with BSI. Among the implications of this work is implementation of the models as a basis for selective rapid microbiological identification, toward earlier administration of appropriate antibiotic therapy. Additionally, our models may help reduce the development of BSI and its associated adverse health outcomes and complications. |
format | Online Article Text |
id | pubmed-8505419 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-85054192021-10-13 Predicting bloodstream infection outcome using machine learning Zoabi, Yazeed Kehat, Orli Lahav, Dan Weiss-Meilik, Ahuva Adler, Amos Shomron, Noam Sci Rep Article Bloodstream infections (BSI) are a main cause of infectious disease morbidity and mortality worldwide. Early prediction of BSI patients at high risk of poor outcomes is important for earlier decision making and effective patient stratification. We developed electronic medical record-based machine learning models that predict patient outcomes of BSI. The area under the receiver-operating characteristics curve was 0.82 for a full featured inclusive model, and 0.81 for a compact model using only 25 features. Our models were trained using electronic medical records that include demographics, blood tests, and the medical and diagnosis history of 7889 hospitalized patients diagnosed with BSI. Among the implications of this work is implementation of the models as a basis for selective rapid microbiological identification, toward earlier administration of appropriate antibiotic therapy. Additionally, our models may help reduce the development of BSI and its associated adverse health outcomes and complications. Nature Publishing Group UK 2021-10-11 /pmc/articles/PMC8505419/ /pubmed/34635696 http://dx.doi.org/10.1038/s41598-021-99105-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Zoabi, Yazeed Kehat, Orli Lahav, Dan Weiss-Meilik, Ahuva Adler, Amos Shomron, Noam Predicting bloodstream infection outcome using machine learning |
title | Predicting bloodstream infection outcome using machine learning |
title_full | Predicting bloodstream infection outcome using machine learning |
title_fullStr | Predicting bloodstream infection outcome using machine learning |
title_full_unstemmed | Predicting bloodstream infection outcome using machine learning |
title_short | Predicting bloodstream infection outcome using machine learning |
title_sort | predicting bloodstream infection outcome using machine learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8505419/ https://www.ncbi.nlm.nih.gov/pubmed/34635696 http://dx.doi.org/10.1038/s41598-021-99105-2 |
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