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Immune cell infiltration signatures identified molecular subtypes and underlying mechanisms in gastric cancer

Increasing evidence has clarified that the tumor microenvironment (TME) is closely related to the prognosis and therapeutic efficacy of cancer. However, there is no reliable TME evaluation system used to accurately predict the prognosis of and therapeutic efficacy in gastric cancer. We evaluated the...

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Autores principales: Lin, Yilin, Pan, Xiaoxian, Zhao, Long, Yang, Changjiang, Zhang, Zhen, Wang, Bo, Gao, Zhidong, Jiang, Kewei, Ye, Yingjiang, Wang, Shan, Shen, Zhanlong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8505616/
https://www.ncbi.nlm.nih.gov/pubmed/34635662
http://dx.doi.org/10.1038/s41525-021-00249-x
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author Lin, Yilin
Pan, Xiaoxian
Zhao, Long
Yang, Changjiang
Zhang, Zhen
Wang, Bo
Gao, Zhidong
Jiang, Kewei
Ye, Yingjiang
Wang, Shan
Shen, Zhanlong
author_facet Lin, Yilin
Pan, Xiaoxian
Zhao, Long
Yang, Changjiang
Zhang, Zhen
Wang, Bo
Gao, Zhidong
Jiang, Kewei
Ye, Yingjiang
Wang, Shan
Shen, Zhanlong
author_sort Lin, Yilin
collection PubMed
description Increasing evidence has clarified that the tumor microenvironment (TME) is closely related to the prognosis and therapeutic efficacy of cancer. However, there is no reliable TME evaluation system used to accurately predict the prognosis of and therapeutic efficacy in gastric cancer. We evaluated the immune microenvironment score (IMS) of 1422 gastric cancer samples based on 51 immune cell signatures. We explored the relationship between the IMS and prognosis, immune cell infiltration, cancer subtype, and potential immune escape mechanisms. The results show that activation of the stroma and decreased levels of immune infiltration were associated with a low IMS. A high IMS was characterized by Epstein–Barr virus infection, increased mutation load, microsatellite instability, and immune cell infiltration. A high IMS was also related to high expression of immune checkpoint molecules (PD-1/PD-L1). Finally, patients with a high IMS had a better response to PD-1/PD-L1 inhibitors and may be more suitable for immune checkpoint inhibitors (area under the curve = 0.81). In addition, a low IMS may be converted into the immune-infiltrating subtype after romidepsin treatment. Stratification based on the IMS may enable gastric cancer patients to benefit more from immunotherapy and help identify new cancer treatment strategies.
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spelling pubmed-85056162021-10-27 Immune cell infiltration signatures identified molecular subtypes and underlying mechanisms in gastric cancer Lin, Yilin Pan, Xiaoxian Zhao, Long Yang, Changjiang Zhang, Zhen Wang, Bo Gao, Zhidong Jiang, Kewei Ye, Yingjiang Wang, Shan Shen, Zhanlong NPJ Genom Med Article Increasing evidence has clarified that the tumor microenvironment (TME) is closely related to the prognosis and therapeutic efficacy of cancer. However, there is no reliable TME evaluation system used to accurately predict the prognosis of and therapeutic efficacy in gastric cancer. We evaluated the immune microenvironment score (IMS) of 1422 gastric cancer samples based on 51 immune cell signatures. We explored the relationship between the IMS and prognosis, immune cell infiltration, cancer subtype, and potential immune escape mechanisms. The results show that activation of the stroma and decreased levels of immune infiltration were associated with a low IMS. A high IMS was characterized by Epstein–Barr virus infection, increased mutation load, microsatellite instability, and immune cell infiltration. A high IMS was also related to high expression of immune checkpoint molecules (PD-1/PD-L1). Finally, patients with a high IMS had a better response to PD-1/PD-L1 inhibitors and may be more suitable for immune checkpoint inhibitors (area under the curve = 0.81). In addition, a low IMS may be converted into the immune-infiltrating subtype after romidepsin treatment. Stratification based on the IMS may enable gastric cancer patients to benefit more from immunotherapy and help identify new cancer treatment strategies. Nature Publishing Group UK 2021-10-11 /pmc/articles/PMC8505616/ /pubmed/34635662 http://dx.doi.org/10.1038/s41525-021-00249-x Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Lin, Yilin
Pan, Xiaoxian
Zhao, Long
Yang, Changjiang
Zhang, Zhen
Wang, Bo
Gao, Zhidong
Jiang, Kewei
Ye, Yingjiang
Wang, Shan
Shen, Zhanlong
Immune cell infiltration signatures identified molecular subtypes and underlying mechanisms in gastric cancer
title Immune cell infiltration signatures identified molecular subtypes and underlying mechanisms in gastric cancer
title_full Immune cell infiltration signatures identified molecular subtypes and underlying mechanisms in gastric cancer
title_fullStr Immune cell infiltration signatures identified molecular subtypes and underlying mechanisms in gastric cancer
title_full_unstemmed Immune cell infiltration signatures identified molecular subtypes and underlying mechanisms in gastric cancer
title_short Immune cell infiltration signatures identified molecular subtypes and underlying mechanisms in gastric cancer
title_sort immune cell infiltration signatures identified molecular subtypes and underlying mechanisms in gastric cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8505616/
https://www.ncbi.nlm.nih.gov/pubmed/34635662
http://dx.doi.org/10.1038/s41525-021-00249-x
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