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Targeting the ENV spike protein of HIV with naturally occurring compounds: an in-silico study for drug designing

Human Immunodeficiency Virus (HIV) infects human by destroying the immune system. The types of HIV strains HIV-1 and HIV-2, among HIV-1 being more prevalent and considered deadly. Eventually either of the strains leads to disease Acquired Immunodeficiency Syndrome (AIDS). Traditional medicinal plant...

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Detalles Bibliográficos
Autores principales: Sreeram, S., Sathishkumar, R., Amritha, P. S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Nature Singapore 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8506072/
http://dx.doi.org/10.1007/s13596-021-00617-z
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author Sreeram, S.
Sathishkumar, R.
Amritha, P. S.
author_facet Sreeram, S.
Sathishkumar, R.
Amritha, P. S.
author_sort Sreeram, S.
collection PubMed
description Human Immunodeficiency Virus (HIV) infects human by destroying the immune system. The types of HIV strains HIV-1 and HIV-2, among HIV-1 being more prevalent and considered deadly. Eventually either of the strains leads to disease Acquired Immunodeficiency Syndrome (AIDS). Traditional medicinal plants have a pivotal role in the modern pharmacological process due to their rich composition of secondary metabolites with significant biological activity. Computational tools are gaining momentum as they predict with higher accuracy, robust and provide insight in the interaction of small molecule with the disease target protein. This study was conducted for understanding the interaction mode of Phyto compounds with Env spike proteins of HIV. The compounds are studied for ADME properties and molecular docking using Schrödinger software was performed. From the results, Ethyl gallate was observed with least docking score and higher binding affinity for HIV-ENV protein (4CC8) and Cinnamyl acetate (cis/trans) with HIV-1-ENV protein (6ULC).
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spelling pubmed-85060722021-10-12 Targeting the ENV spike protein of HIV with naturally occurring compounds: an in-silico study for drug designing Sreeram, S. Sathishkumar, R. Amritha, P. S. ADV TRADIT MED (ADTM) Research Article Human Immunodeficiency Virus (HIV) infects human by destroying the immune system. The types of HIV strains HIV-1 and HIV-2, among HIV-1 being more prevalent and considered deadly. Eventually either of the strains leads to disease Acquired Immunodeficiency Syndrome (AIDS). Traditional medicinal plants have a pivotal role in the modern pharmacological process due to their rich composition of secondary metabolites with significant biological activity. Computational tools are gaining momentum as they predict with higher accuracy, robust and provide insight in the interaction of small molecule with the disease target protein. This study was conducted for understanding the interaction mode of Phyto compounds with Env spike proteins of HIV. The compounds are studied for ADME properties and molecular docking using Schrödinger software was performed. From the results, Ethyl gallate was observed with least docking score and higher binding affinity for HIV-ENV protein (4CC8) and Cinnamyl acetate (cis/trans) with HIV-1-ENV protein (6ULC). Springer Nature Singapore 2021-10-12 2023 /pmc/articles/PMC8506072/ http://dx.doi.org/10.1007/s13596-021-00617-z Text en © Institute of Korean Medicine, Kyung Hee University 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Research Article
Sreeram, S.
Sathishkumar, R.
Amritha, P. S.
Targeting the ENV spike protein of HIV with naturally occurring compounds: an in-silico study for drug designing
title Targeting the ENV spike protein of HIV with naturally occurring compounds: an in-silico study for drug designing
title_full Targeting the ENV spike protein of HIV with naturally occurring compounds: an in-silico study for drug designing
title_fullStr Targeting the ENV spike protein of HIV with naturally occurring compounds: an in-silico study for drug designing
title_full_unstemmed Targeting the ENV spike protein of HIV with naturally occurring compounds: an in-silico study for drug designing
title_short Targeting the ENV spike protein of HIV with naturally occurring compounds: an in-silico study for drug designing
title_sort targeting the env spike protein of hiv with naturally occurring compounds: an in-silico study for drug designing
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8506072/
http://dx.doi.org/10.1007/s13596-021-00617-z
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