Cargando…
Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation
Bacterial biofilms are communities of bacteria that exist as aggregates that can adhere to surfaces or be free-standing. This complex, social mode of cellular organization is fundamental to the physiology of microbes and often exhibits surprising behavior. Bacterial biofilms are more than the sum of...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8506656/ https://www.ncbi.nlm.nih.gov/pubmed/33462162 http://dx.doi.org/10.1088/1478-3975/abdc0e |
_version_ | 1784581736632418304 |
---|---|
author | Wong, Gerard C L Antani, Jyot D Lele, Pushkar P Chen, Jing Nan, Beiyan Kühn, Marco J Persat, Alexandre Bru, Jean-Louis Høyland-Kroghsbo, Nina Molin Siryaporn, Albert Conrad, Jacinta C Carrara, Francesco Yawata, Yutaka Stocker, Roman Brun, Yves V Whitfield, Gregory B Lee, Calvin K de Anda, Jaime Schmidt, William C Golestanian, Ramin O’Toole, George A Floyd, Kyle A Yildiz, Fitnat H Yang, Shuai Jin, Fan Toyofuku, Masanori Eberl, Leo Nomura, Nobuhiko Zacharoff, Lori A El-Naggar, Mohamed Y Yalcin, Sibel Ebru Malvankar, Nikhil S Rojas-Andrade, Mauricio D Hochbaum, Allon I Yan, Jing Stone, Howard A Wingreen, Ned S Bassler, Bonnie L Wu, Yilin Xu, Haoran Drescher, Knut Dunkel, Jörn |
author_facet | Wong, Gerard C L Antani, Jyot D Lele, Pushkar P Chen, Jing Nan, Beiyan Kühn, Marco J Persat, Alexandre Bru, Jean-Louis Høyland-Kroghsbo, Nina Molin Siryaporn, Albert Conrad, Jacinta C Carrara, Francesco Yawata, Yutaka Stocker, Roman Brun, Yves V Whitfield, Gregory B Lee, Calvin K de Anda, Jaime Schmidt, William C Golestanian, Ramin O’Toole, George A Floyd, Kyle A Yildiz, Fitnat H Yang, Shuai Jin, Fan Toyofuku, Masanori Eberl, Leo Nomura, Nobuhiko Zacharoff, Lori A El-Naggar, Mohamed Y Yalcin, Sibel Ebru Malvankar, Nikhil S Rojas-Andrade, Mauricio D Hochbaum, Allon I Yan, Jing Stone, Howard A Wingreen, Ned S Bassler, Bonnie L Wu, Yilin Xu, Haoran Drescher, Knut Dunkel, Jörn |
author_sort | Wong, Gerard C L |
collection | PubMed |
description | Bacterial biofilms are communities of bacteria that exist as aggregates that can adhere to surfaces or be free-standing. This complex, social mode of cellular organization is fundamental to the physiology of microbes and often exhibits surprising behavior. Bacterial biofilms are more than the sum of their parts: single-cell behavior has a complex relation to collective community behavior, in a manner perhaps cognate to the complex relation between atomic physics and condensed matter physics. Biofilm microbiology is a relatively young field by biology standards, but it has already attracted intense attention from physicists. Sometimes, this attention takes the form of seeing biofilms as inspiration for new physics. In this roadmap, we highlight the work of those who have taken the opposite strategy: we highlight the work of physicists and physical scientists who use physics to engage fundamental concepts in bacterial biofilm microbiology, including adhesion, sensing, motility, signaling, memory, energy flow, community formation and cooperativity. These contributions are juxtaposed with microbiologists who have made recent important discoveries on bacterial biofilms using state-of-the-art physical methods. The contributions to this roadmap exemplify how well physics and biology can be combined to achieve a new synthesis, rather than just a division of labor. |
format | Online Article Text |
id | pubmed-8506656 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
record_format | MEDLINE/PubMed |
spelling | pubmed-85066562022-06-23 Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation Wong, Gerard C L Antani, Jyot D Lele, Pushkar P Chen, Jing Nan, Beiyan Kühn, Marco J Persat, Alexandre Bru, Jean-Louis Høyland-Kroghsbo, Nina Molin Siryaporn, Albert Conrad, Jacinta C Carrara, Francesco Yawata, Yutaka Stocker, Roman Brun, Yves V Whitfield, Gregory B Lee, Calvin K de Anda, Jaime Schmidt, William C Golestanian, Ramin O’Toole, George A Floyd, Kyle A Yildiz, Fitnat H Yang, Shuai Jin, Fan Toyofuku, Masanori Eberl, Leo Nomura, Nobuhiko Zacharoff, Lori A El-Naggar, Mohamed Y Yalcin, Sibel Ebru Malvankar, Nikhil S Rojas-Andrade, Mauricio D Hochbaum, Allon I Yan, Jing Stone, Howard A Wingreen, Ned S Bassler, Bonnie L Wu, Yilin Xu, Haoran Drescher, Knut Dunkel, Jörn Phys Biol Article Bacterial biofilms are communities of bacteria that exist as aggregates that can adhere to surfaces or be free-standing. This complex, social mode of cellular organization is fundamental to the physiology of microbes and often exhibits surprising behavior. Bacterial biofilms are more than the sum of their parts: single-cell behavior has a complex relation to collective community behavior, in a manner perhaps cognate to the complex relation between atomic physics and condensed matter physics. Biofilm microbiology is a relatively young field by biology standards, but it has already attracted intense attention from physicists. Sometimes, this attention takes the form of seeing biofilms as inspiration for new physics. In this roadmap, we highlight the work of those who have taken the opposite strategy: we highlight the work of physicists and physical scientists who use physics to engage fundamental concepts in bacterial biofilm microbiology, including adhesion, sensing, motility, signaling, memory, energy flow, community formation and cooperativity. These contributions are juxtaposed with microbiologists who have made recent important discoveries on bacterial biofilms using state-of-the-art physical methods. The contributions to this roadmap exemplify how well physics and biology can be combined to achieve a new synthesis, rather than just a division of labor. 2021-06-23 /pmc/articles/PMC8506656/ /pubmed/33462162 http://dx.doi.org/10.1088/1478-3975/abdc0e Text en https://creativecommons.org/licenses/by/4.0/Original content from this work may be used under the terms of the Creative Commons Attribution 4.0 licence (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Wong, Gerard C L Antani, Jyot D Lele, Pushkar P Chen, Jing Nan, Beiyan Kühn, Marco J Persat, Alexandre Bru, Jean-Louis Høyland-Kroghsbo, Nina Molin Siryaporn, Albert Conrad, Jacinta C Carrara, Francesco Yawata, Yutaka Stocker, Roman Brun, Yves V Whitfield, Gregory B Lee, Calvin K de Anda, Jaime Schmidt, William C Golestanian, Ramin O’Toole, George A Floyd, Kyle A Yildiz, Fitnat H Yang, Shuai Jin, Fan Toyofuku, Masanori Eberl, Leo Nomura, Nobuhiko Zacharoff, Lori A El-Naggar, Mohamed Y Yalcin, Sibel Ebru Malvankar, Nikhil S Rojas-Andrade, Mauricio D Hochbaum, Allon I Yan, Jing Stone, Howard A Wingreen, Ned S Bassler, Bonnie L Wu, Yilin Xu, Haoran Drescher, Knut Dunkel, Jörn Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation |
title | Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation |
title_full | Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation |
title_fullStr | Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation |
title_full_unstemmed | Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation |
title_short | Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation |
title_sort | roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8506656/ https://www.ncbi.nlm.nih.gov/pubmed/33462162 http://dx.doi.org/10.1088/1478-3975/abdc0e |
work_keys_str_mv | AT wonggerardcl roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT antanijyotd roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT lelepushkarp roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT chenjing roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT nanbeiyan roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT kuhnmarcoj roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT persatalexandre roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT brujeanlouis roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT høylandkroghsboninamolin roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT siryapornalbert roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT conradjacintac roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT carrarafrancesco roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT yawatayutaka roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT stockerroman roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT brunyvesv roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT whitfieldgregoryb roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT leecalvink roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT deandajaime roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT schmidtwilliamc roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT golestanianramin roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT otoolegeorgea roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT floydkylea roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT yildizfitnath roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT yangshuai roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT jinfan roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT toyofukumasanori roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT eberlleo roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT nomuranobuhiko roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT zacharoffloria roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT elnaggarmohamedy roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT yalcinsibelebru roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT malvankarnikhils roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT rojasandrademauriciod roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT hochbaumalloni roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT yanjing roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT stonehowarda roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT wingreenneds roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT basslerbonniel roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT wuyilin roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT xuhaoran roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT drescherknut roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation AT dunkeljorn roadmaponemergingconceptsinthephysicalbiologyofbacterialbiofilmsfromsurfacesensingtocommunityformation |