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Genome-Wide Identification and Expression Profiling of the BZR Transcription Factor Gene Family in Nicotiana benthamiana

Brassinazole-resistant (BZR) family genes encode plant-specific transcription factors (TFs), play essential roles in the regulation of plant growth and development, and have multiple stress-resistance functions. Nicotiana benthamiana is a model plant widely used in basic research. However, members o...

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Autores principales: Chen, Xuwei, Wu, Xinyang, Qiu, Shiyou, Zheng, Hongying, Lu, Yuwen, Peng, Jiejun, Wu, Guanwei, Chen, Jianping, Rao, Shaofei, Yan, Fei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8508657/
https://www.ncbi.nlm.nih.gov/pubmed/34638720
http://dx.doi.org/10.3390/ijms221910379
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author Chen, Xuwei
Wu, Xinyang
Qiu, Shiyou
Zheng, Hongying
Lu, Yuwen
Peng, Jiejun
Wu, Guanwei
Chen, Jianping
Rao, Shaofei
Yan, Fei
author_facet Chen, Xuwei
Wu, Xinyang
Qiu, Shiyou
Zheng, Hongying
Lu, Yuwen
Peng, Jiejun
Wu, Guanwei
Chen, Jianping
Rao, Shaofei
Yan, Fei
author_sort Chen, Xuwei
collection PubMed
description Brassinazole-resistant (BZR) family genes encode plant-specific transcription factors (TFs), play essential roles in the regulation of plant growth and development, and have multiple stress-resistance functions. Nicotiana benthamiana is a model plant widely used in basic research. However, members of the BZR family in N. benthamiana have not been identified, and little is known about their function in abiotic stress. In this study, a total of 14 BZR members were identified in the N. benthamiana genome, which could be divided into four groups according to a phylogenetic tree. NbBZRs have similar exon-intron structures and conserved motifs, and may be regulated by cis-acting elements such as STRE, TCA, and ARE, etc. Organ-specific expression analysis showed that NbBZR members have different and diverse expression patterns in different tissues, and most of the members are expressed in roots, stems, and leaves. The analysis of the expression patterns in response to different abiotic stresses showed that all the tested NbBZR members showed a significant down-regulation after drought treatment. Many NbBZR genes also responded in various ways to cold, heat and salt stress treatments. The results imply that NbBZRs have multiple functions related to stress resistance.
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spelling pubmed-85086572021-10-13 Genome-Wide Identification and Expression Profiling of the BZR Transcription Factor Gene Family in Nicotiana benthamiana Chen, Xuwei Wu, Xinyang Qiu, Shiyou Zheng, Hongying Lu, Yuwen Peng, Jiejun Wu, Guanwei Chen, Jianping Rao, Shaofei Yan, Fei Int J Mol Sci Article Brassinazole-resistant (BZR) family genes encode plant-specific transcription factors (TFs), play essential roles in the regulation of plant growth and development, and have multiple stress-resistance functions. Nicotiana benthamiana is a model plant widely used in basic research. However, members of the BZR family in N. benthamiana have not been identified, and little is known about their function in abiotic stress. In this study, a total of 14 BZR members were identified in the N. benthamiana genome, which could be divided into four groups according to a phylogenetic tree. NbBZRs have similar exon-intron structures and conserved motifs, and may be regulated by cis-acting elements such as STRE, TCA, and ARE, etc. Organ-specific expression analysis showed that NbBZR members have different and diverse expression patterns in different tissues, and most of the members are expressed in roots, stems, and leaves. The analysis of the expression patterns in response to different abiotic stresses showed that all the tested NbBZR members showed a significant down-regulation after drought treatment. Many NbBZR genes also responded in various ways to cold, heat and salt stress treatments. The results imply that NbBZRs have multiple functions related to stress resistance. MDPI 2021-09-26 /pmc/articles/PMC8508657/ /pubmed/34638720 http://dx.doi.org/10.3390/ijms221910379 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Chen, Xuwei
Wu, Xinyang
Qiu, Shiyou
Zheng, Hongying
Lu, Yuwen
Peng, Jiejun
Wu, Guanwei
Chen, Jianping
Rao, Shaofei
Yan, Fei
Genome-Wide Identification and Expression Profiling of the BZR Transcription Factor Gene Family in Nicotiana benthamiana
title Genome-Wide Identification and Expression Profiling of the BZR Transcription Factor Gene Family in Nicotiana benthamiana
title_full Genome-Wide Identification and Expression Profiling of the BZR Transcription Factor Gene Family in Nicotiana benthamiana
title_fullStr Genome-Wide Identification and Expression Profiling of the BZR Transcription Factor Gene Family in Nicotiana benthamiana
title_full_unstemmed Genome-Wide Identification and Expression Profiling of the BZR Transcription Factor Gene Family in Nicotiana benthamiana
title_short Genome-Wide Identification and Expression Profiling of the BZR Transcription Factor Gene Family in Nicotiana benthamiana
title_sort genome-wide identification and expression profiling of the bzr transcription factor gene family in nicotiana benthamiana
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8508657/
https://www.ncbi.nlm.nih.gov/pubmed/34638720
http://dx.doi.org/10.3390/ijms221910379
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