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Mediation model with a categorical exposure and a censored mediator with application to a genetic study

Mediation analysis is a statistical method for evaluating the direct and indirect effects of an exposure on an outcome in the presence of a mediator. Mediation models have been widely used to determine direct and indirect contributions of genetic variants in clinical phenotypes. In genetic studies,...

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Detalles Bibliográficos
Autores principales: Wang, Jian, Ning, Jing, Shete, Sanjay
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8509986/
https://www.ncbi.nlm.nih.gov/pubmed/34637449
http://dx.doi.org/10.1371/journal.pone.0257628
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author Wang, Jian
Ning, Jing
Shete, Sanjay
author_facet Wang, Jian
Ning, Jing
Shete, Sanjay
author_sort Wang, Jian
collection PubMed
description Mediation analysis is a statistical method for evaluating the direct and indirect effects of an exposure on an outcome in the presence of a mediator. Mediation models have been widely used to determine direct and indirect contributions of genetic variants in clinical phenotypes. In genetic studies, the additive genetic model is the most commonly used model because it can detect effects from either recessive or dominant models (or any model in between). However, the existing approaches for mediation model cannot be directly applied when the genetic model is additive (e.g. the most commonly used model for SNPs) or categorical (e.g. polymorphic loci), and thus modification to measures of indirect and direct effects is warranted. In this study, we proposed overall measures of indirect, direct, and total effects for a mediation model with a categorical exposure and a censored mediator, which accounts for the frequency of different values of the categorical exposure. The proposed approach provides the overall contribution of the categorical exposure to the outcome variable. We assessed the empirical performance of the proposed overall measures via simulation studies and applied the measures to evaluate the mediating effect of a women’s age at menopause on the association between genetic variants and type 2 diabetes.
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spelling pubmed-85099862021-10-13 Mediation model with a categorical exposure and a censored mediator with application to a genetic study Wang, Jian Ning, Jing Shete, Sanjay PLoS One Research Article Mediation analysis is a statistical method for evaluating the direct and indirect effects of an exposure on an outcome in the presence of a mediator. Mediation models have been widely used to determine direct and indirect contributions of genetic variants in clinical phenotypes. In genetic studies, the additive genetic model is the most commonly used model because it can detect effects from either recessive or dominant models (or any model in between). However, the existing approaches for mediation model cannot be directly applied when the genetic model is additive (e.g. the most commonly used model for SNPs) or categorical (e.g. polymorphic loci), and thus modification to measures of indirect and direct effects is warranted. In this study, we proposed overall measures of indirect, direct, and total effects for a mediation model with a categorical exposure and a censored mediator, which accounts for the frequency of different values of the categorical exposure. The proposed approach provides the overall contribution of the categorical exposure to the outcome variable. We assessed the empirical performance of the proposed overall measures via simulation studies and applied the measures to evaluate the mediating effect of a women’s age at menopause on the association between genetic variants and type 2 diabetes. Public Library of Science 2021-10-12 /pmc/articles/PMC8509986/ /pubmed/34637449 http://dx.doi.org/10.1371/journal.pone.0257628 Text en © 2021 Wang et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Wang, Jian
Ning, Jing
Shete, Sanjay
Mediation model with a categorical exposure and a censored mediator with application to a genetic study
title Mediation model with a categorical exposure and a censored mediator with application to a genetic study
title_full Mediation model with a categorical exposure and a censored mediator with application to a genetic study
title_fullStr Mediation model with a categorical exposure and a censored mediator with application to a genetic study
title_full_unstemmed Mediation model with a categorical exposure and a censored mediator with application to a genetic study
title_short Mediation model with a categorical exposure and a censored mediator with application to a genetic study
title_sort mediation model with a categorical exposure and a censored mediator with application to a genetic study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8509986/
https://www.ncbi.nlm.nih.gov/pubmed/34637449
http://dx.doi.org/10.1371/journal.pone.0257628
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