Cargando…

Biogeochemistry Goes Viral: towards a Multifaceted Approach To Study Viruses and Biogeochemical Cycling

Viruses are ubiquitous on Earth and are keystone components of environments, ecosystems, and human health. Yet, viruses remain poorly studied because most cannot be isolated in a laboratory. In the field of biogeochemistry, which aims to understand the interactions between biology, geology, and chem...

Descripción completa

Detalles Bibliográficos
Autores principales: Tran, Patricia Q., Anantharaman, Karthik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8510517/
https://www.ncbi.nlm.nih.gov/pubmed/34636672
http://dx.doi.org/10.1128/mSystems.01138-21
_version_ 1784582591110709248
author Tran, Patricia Q.
Anantharaman, Karthik
author_facet Tran, Patricia Q.
Anantharaman, Karthik
author_sort Tran, Patricia Q.
collection PubMed
description Viruses are ubiquitous on Earth and are keystone components of environments, ecosystems, and human health. Yet, viruses remain poorly studied because most cannot be isolated in a laboratory. In the field of biogeochemistry, which aims to understand the interactions between biology, geology, and chemistry, there is progress to be made in understanding the different roles played by viruses in nutrient cycling, food webs, and elemental transformations. In this commentary, we outline current microbial ecology frameworks for understanding biogeochemical cycling in aquatic ecosystems. Next, we review some existing experimental and computational techniques that are enabling us to study the role of viruses in biogeochemical cycling, using examples from aquatic environments. Finally, we provide a conceptual model that balances limitations of computational tools when combined with biogeochemistry and ecological data. We envision meeting the grand challenge of understanding how viruses impact biogeochemical cycling by using a multifaceted approach to viral ecology.
format Online
Article
Text
id pubmed-8510517
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-85105172021-10-27 Biogeochemistry Goes Viral: towards a Multifaceted Approach To Study Viruses and Biogeochemical Cycling Tran, Patricia Q. Anantharaman, Karthik mSystems Commentary Viruses are ubiquitous on Earth and are keystone components of environments, ecosystems, and human health. Yet, viruses remain poorly studied because most cannot be isolated in a laboratory. In the field of biogeochemistry, which aims to understand the interactions between biology, geology, and chemistry, there is progress to be made in understanding the different roles played by viruses in nutrient cycling, food webs, and elemental transformations. In this commentary, we outline current microbial ecology frameworks for understanding biogeochemical cycling in aquatic ecosystems. Next, we review some existing experimental and computational techniques that are enabling us to study the role of viruses in biogeochemical cycling, using examples from aquatic environments. Finally, we provide a conceptual model that balances limitations of computational tools when combined with biogeochemistry and ecological data. We envision meeting the grand challenge of understanding how viruses impact biogeochemical cycling by using a multifaceted approach to viral ecology. American Society for Microbiology 2021-10-12 /pmc/articles/PMC8510517/ /pubmed/34636672 http://dx.doi.org/10.1128/mSystems.01138-21 Text en Copyright © 2021 Tran and Anantharaman. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Commentary
Tran, Patricia Q.
Anantharaman, Karthik
Biogeochemistry Goes Viral: towards a Multifaceted Approach To Study Viruses and Biogeochemical Cycling
title Biogeochemistry Goes Viral: towards a Multifaceted Approach To Study Viruses and Biogeochemical Cycling
title_full Biogeochemistry Goes Viral: towards a Multifaceted Approach To Study Viruses and Biogeochemical Cycling
title_fullStr Biogeochemistry Goes Viral: towards a Multifaceted Approach To Study Viruses and Biogeochemical Cycling
title_full_unstemmed Biogeochemistry Goes Viral: towards a Multifaceted Approach To Study Viruses and Biogeochemical Cycling
title_short Biogeochemistry Goes Viral: towards a Multifaceted Approach To Study Viruses and Biogeochemical Cycling
title_sort biogeochemistry goes viral: towards a multifaceted approach to study viruses and biogeochemical cycling
topic Commentary
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8510517/
https://www.ncbi.nlm.nih.gov/pubmed/34636672
http://dx.doi.org/10.1128/mSystems.01138-21
work_keys_str_mv AT tranpatriciaq biogeochemistrygoesviraltowardsamultifacetedapproachtostudyvirusesandbiogeochemicalcycling
AT anantharamankarthik biogeochemistrygoesviraltowardsamultifacetedapproachtostudyvirusesandbiogeochemicalcycling