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The BrAID study protocol: integration of machine learning and transcriptomics for brugada syndrome recognition

BACKGROUND: Type 1 Brugada syndrome (BrS) is a hereditary arrhythmogenic disease showing peculiar electrocardiographic (ECG) patterns, characterized by ST-segment elevation in the right precordial leads, and risk of Sudden Cardiac Death (SCD). Furthermore, although various ECG patterns are described...

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Autores principales: Morales, M. A., Piacenti, M., Nesti, M., Solarino, G., Pieragnoli, P., Zucchelli, G., Del Ry, S., Cabiati, M., Vozzi, F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8513180/
https://www.ncbi.nlm.nih.gov/pubmed/34645390
http://dx.doi.org/10.1186/s12872-021-02280-3
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author Morales, M. A.
Piacenti, M.
Nesti, M.
Solarino, G.
Pieragnoli, P.
Zucchelli, G.
Del Ry, S.
Cabiati, M.
Vozzi, F.
author_facet Morales, M. A.
Piacenti, M.
Nesti, M.
Solarino, G.
Pieragnoli, P.
Zucchelli, G.
Del Ry, S.
Cabiati, M.
Vozzi, F.
author_sort Morales, M. A.
collection PubMed
description BACKGROUND: Type 1 Brugada syndrome (BrS) is a hereditary arrhythmogenic disease showing peculiar electrocardiographic (ECG) patterns, characterized by ST-segment elevation in the right precordial leads, and risk of Sudden Cardiac Death (SCD). Furthermore, although various ECG patterns are described in the literature, different individual ECG may show high-grade variability, making the diagnosis problematic. The study aims to develop an innovative system for an accurate diagnosis of Type 1 BrS based on ECG pattern recognition by Machine Learning (ML) models and blood markers analysis trough transcriptomic techniques. METHODS: The study is structured in 3 parts: (a) a retrospective study, with the first cohort of 300 anonymized ECG obtained in already diagnosed Type 1 BrS (75 spontaneous, 150 suspected) and 75 from control patients, which will be processed by ML analysis for pattern recognition; (b) a prospective study, with a cohort of 11 patients with spontaneous Type 1 BrS, 11 with drug-induced Type 1 BrS, 11 suspected BrS but negative to Na + channel blockers administration, and 11 controls, enrolled for ECG ML analysis and blood collection for transcriptomics and microvesicles analysis; (c) a validation study, with the third cohort of 100 patients (35 spontaneous and 35 drug-induced BrS, 30 controls) for ML algorithm and biomarkers testing. DISCUSSION: The BrAID system will help clinicians improve the diagnosis of Type 1 BrS by using multiple information, reducing the time between ECG recording and final diagnosis, integrating clinical, biochemical and ECG information thus favoring a more effective use of available resources. Trial registration Clinical Trial.gov, NCT04641585. Registered 17 November 2020, https://clinicaltrials.gov/ct2/show/NCT04641585
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spelling pubmed-85131802021-10-20 The BrAID study protocol: integration of machine learning and transcriptomics for brugada syndrome recognition Morales, M. A. Piacenti, M. Nesti, M. Solarino, G. Pieragnoli, P. Zucchelli, G. Del Ry, S. Cabiati, M. Vozzi, F. BMC Cardiovasc Disord Study Protocol BACKGROUND: Type 1 Brugada syndrome (BrS) is a hereditary arrhythmogenic disease showing peculiar electrocardiographic (ECG) patterns, characterized by ST-segment elevation in the right precordial leads, and risk of Sudden Cardiac Death (SCD). Furthermore, although various ECG patterns are described in the literature, different individual ECG may show high-grade variability, making the diagnosis problematic. The study aims to develop an innovative system for an accurate diagnosis of Type 1 BrS based on ECG pattern recognition by Machine Learning (ML) models and blood markers analysis trough transcriptomic techniques. METHODS: The study is structured in 3 parts: (a) a retrospective study, with the first cohort of 300 anonymized ECG obtained in already diagnosed Type 1 BrS (75 spontaneous, 150 suspected) and 75 from control patients, which will be processed by ML analysis for pattern recognition; (b) a prospective study, with a cohort of 11 patients with spontaneous Type 1 BrS, 11 with drug-induced Type 1 BrS, 11 suspected BrS but negative to Na + channel blockers administration, and 11 controls, enrolled for ECG ML analysis and blood collection for transcriptomics and microvesicles analysis; (c) a validation study, with the third cohort of 100 patients (35 spontaneous and 35 drug-induced BrS, 30 controls) for ML algorithm and biomarkers testing. DISCUSSION: The BrAID system will help clinicians improve the diagnosis of Type 1 BrS by using multiple information, reducing the time between ECG recording and final diagnosis, integrating clinical, biochemical and ECG information thus favoring a more effective use of available resources. Trial registration Clinical Trial.gov, NCT04641585. Registered 17 November 2020, https://clinicaltrials.gov/ct2/show/NCT04641585 BioMed Central 2021-10-13 /pmc/articles/PMC8513180/ /pubmed/34645390 http://dx.doi.org/10.1186/s12872-021-02280-3 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Study Protocol
Morales, M. A.
Piacenti, M.
Nesti, M.
Solarino, G.
Pieragnoli, P.
Zucchelli, G.
Del Ry, S.
Cabiati, M.
Vozzi, F.
The BrAID study protocol: integration of machine learning and transcriptomics for brugada syndrome recognition
title The BrAID study protocol: integration of machine learning and transcriptomics for brugada syndrome recognition
title_full The BrAID study protocol: integration of machine learning and transcriptomics for brugada syndrome recognition
title_fullStr The BrAID study protocol: integration of machine learning and transcriptomics for brugada syndrome recognition
title_full_unstemmed The BrAID study protocol: integration of machine learning and transcriptomics for brugada syndrome recognition
title_short The BrAID study protocol: integration of machine learning and transcriptomics for brugada syndrome recognition
title_sort braid study protocol: integration of machine learning and transcriptomics for brugada syndrome recognition
topic Study Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8513180/
https://www.ncbi.nlm.nih.gov/pubmed/34645390
http://dx.doi.org/10.1186/s12872-021-02280-3
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