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Detection of COVID-19 from voice, cough and breathing patterns: Dataset and preliminary results

COVID-19 heavily affects breathing and voice and causes symptoms that make patients’ voices distinctive, creating recognizable audio signatures. Initial studies have already suggested the potential of using voice as a screening solution. In this article we present a dataset of voice, cough and breat...

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Autores principales: Despotovic, Vladimir, Ismael, Muhannad, Cornil, Maël, Call, Roderick Mc, Fagherazzi, Guy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8513517/
https://www.ncbi.nlm.nih.gov/pubmed/34656870
http://dx.doi.org/10.1016/j.compbiomed.2021.104944
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author Despotovic, Vladimir
Ismael, Muhannad
Cornil, Maël
Call, Roderick Mc
Fagherazzi, Guy
author_facet Despotovic, Vladimir
Ismael, Muhannad
Cornil, Maël
Call, Roderick Mc
Fagherazzi, Guy
author_sort Despotovic, Vladimir
collection PubMed
description COVID-19 heavily affects breathing and voice and causes symptoms that make patients’ voices distinctive, creating recognizable audio signatures. Initial studies have already suggested the potential of using voice as a screening solution. In this article we present a dataset of voice, cough and breathing audio recordings collected from individuals infected by SARS-CoV-2 virus, as well as non-infected subjects via large scale crowdsourced campaign. We describe preliminary results for detection of COVID-19 from cough patterns using standard acoustic features sets, wavelet scattering features and deep audio embeddings extracted from low-level feature representations (VGGish and OpenL3). Our models achieve accuracy of 88.52%, sensitivity of 88.75% and specificity of 90.87%, confirming the applicability of audio signatures to identify COVID-19 symptoms. We furthermore provide an in-depth analysis of the most informative acoustic features and try to elucidate the mechanisms that alter the acoustic characteristics of coughs of people with COVID-19.
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spelling pubmed-85135172021-10-13 Detection of COVID-19 from voice, cough and breathing patterns: Dataset and preliminary results Despotovic, Vladimir Ismael, Muhannad Cornil, Maël Call, Roderick Mc Fagherazzi, Guy Comput Biol Med Article COVID-19 heavily affects breathing and voice and causes symptoms that make patients’ voices distinctive, creating recognizable audio signatures. Initial studies have already suggested the potential of using voice as a screening solution. In this article we present a dataset of voice, cough and breathing audio recordings collected from individuals infected by SARS-CoV-2 virus, as well as non-infected subjects via large scale crowdsourced campaign. We describe preliminary results for detection of COVID-19 from cough patterns using standard acoustic features sets, wavelet scattering features and deep audio embeddings extracted from low-level feature representations (VGGish and OpenL3). Our models achieve accuracy of 88.52%, sensitivity of 88.75% and specificity of 90.87%, confirming the applicability of audio signatures to identify COVID-19 symptoms. We furthermore provide an in-depth analysis of the most informative acoustic features and try to elucidate the mechanisms that alter the acoustic characteristics of coughs of people with COVID-19. The Authors. Published by Elsevier Ltd. 2021-11 2021-10-13 /pmc/articles/PMC8513517/ /pubmed/34656870 http://dx.doi.org/10.1016/j.compbiomed.2021.104944 Text en © 2021 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Despotovic, Vladimir
Ismael, Muhannad
Cornil, Maël
Call, Roderick Mc
Fagherazzi, Guy
Detection of COVID-19 from voice, cough and breathing patterns: Dataset and preliminary results
title Detection of COVID-19 from voice, cough and breathing patterns: Dataset and preliminary results
title_full Detection of COVID-19 from voice, cough and breathing patterns: Dataset and preliminary results
title_fullStr Detection of COVID-19 from voice, cough and breathing patterns: Dataset and preliminary results
title_full_unstemmed Detection of COVID-19 from voice, cough and breathing patterns: Dataset and preliminary results
title_short Detection of COVID-19 from voice, cough and breathing patterns: Dataset and preliminary results
title_sort detection of covid-19 from voice, cough and breathing patterns: dataset and preliminary results
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8513517/
https://www.ncbi.nlm.nih.gov/pubmed/34656870
http://dx.doi.org/10.1016/j.compbiomed.2021.104944
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