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Multiple valence electron detachment following Auger decay of inner-shell vacancies in gas-phase DNA

We have studied soft X-ray photoabsorption in the doubly deprotonated gas-phase oligonucleotide [dTGGGGT–2H](2−). The dominating decay mechanism of the X-ray induced inner shell vacancy was found to be Auger decay with detachment of at least three electrons, leading to charge reversal of the anionic...

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Autores principales: Li, Wen, Kavatsyuk, Oksana, Douma, Wessel, Wang, Xin, Hoekstra, Ronnie, Mayer, Dennis, Robinson, Matthew S., Gühr, Markus, Lalande, Mathieu, Abdelmouleh, Marwa, Ryszka, Michal, Poully, Jean Christophe, Schlathölter, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8513815/
https://www.ncbi.nlm.nih.gov/pubmed/34745549
http://dx.doi.org/10.1039/d1sc02885e
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author Li, Wen
Kavatsyuk, Oksana
Douma, Wessel
Wang, Xin
Hoekstra, Ronnie
Mayer, Dennis
Robinson, Matthew S.
Gühr, Markus
Lalande, Mathieu
Abdelmouleh, Marwa
Ryszka, Michal
Poully, Jean Christophe
Schlathölter, Thomas
author_facet Li, Wen
Kavatsyuk, Oksana
Douma, Wessel
Wang, Xin
Hoekstra, Ronnie
Mayer, Dennis
Robinson, Matthew S.
Gühr, Markus
Lalande, Mathieu
Abdelmouleh, Marwa
Ryszka, Michal
Poully, Jean Christophe
Schlathölter, Thomas
author_sort Li, Wen
collection PubMed
description We have studied soft X-ray photoabsorption in the doubly deprotonated gas-phase oligonucleotide [dTGGGGT–2H](2−). The dominating decay mechanism of the X-ray induced inner shell vacancy was found to be Auger decay with detachment of at least three electrons, leading to charge reversal of the anionic precursor and the formation of positively charged photofragment ions. The same process is observed in heavy ion (12 MeV C(4+)) collisions with [dTGGGGT–2H](2−) where inner shell vacancies are generated as well, but with smaller probability. Auger decay of a single K-vacancy in DNA, followed by detachment of three or more low energy electrons instead of a single high energy electron has profound implications for DNA damage and damage modelling. The production of three low kinetic energy electrons with short mean free path instead of one high kinetic energy electron with long mean free path implies that electron-induced DNA damage will be much more localized around the initial K-shell vacancy. The fragmentation channels, triggered by triple electron detachment Auger decay are predominantly related to protonated guanine base loss and even loss of protonated guanine dimers is tentatively observed. The fragmentation is not a consequence of the initial K-shell vacancy but purely due to multiple detachment of valence electrons, as a very similar positive ion fragmentation pattern is observed in femtosecond laser-induced dissociation experiments.
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spelling pubmed-85138152021-11-04 Multiple valence electron detachment following Auger decay of inner-shell vacancies in gas-phase DNA Li, Wen Kavatsyuk, Oksana Douma, Wessel Wang, Xin Hoekstra, Ronnie Mayer, Dennis Robinson, Matthew S. Gühr, Markus Lalande, Mathieu Abdelmouleh, Marwa Ryszka, Michal Poully, Jean Christophe Schlathölter, Thomas Chem Sci Chemistry We have studied soft X-ray photoabsorption in the doubly deprotonated gas-phase oligonucleotide [dTGGGGT–2H](2−). The dominating decay mechanism of the X-ray induced inner shell vacancy was found to be Auger decay with detachment of at least three electrons, leading to charge reversal of the anionic precursor and the formation of positively charged photofragment ions. The same process is observed in heavy ion (12 MeV C(4+)) collisions with [dTGGGGT–2H](2−) where inner shell vacancies are generated as well, but with smaller probability. Auger decay of a single K-vacancy in DNA, followed by detachment of three or more low energy electrons instead of a single high energy electron has profound implications for DNA damage and damage modelling. The production of three low kinetic energy electrons with short mean free path instead of one high kinetic energy electron with long mean free path implies that electron-induced DNA damage will be much more localized around the initial K-shell vacancy. The fragmentation channels, triggered by triple electron detachment Auger decay are predominantly related to protonated guanine base loss and even loss of protonated guanine dimers is tentatively observed. The fragmentation is not a consequence of the initial K-shell vacancy but purely due to multiple detachment of valence electrons, as a very similar positive ion fragmentation pattern is observed in femtosecond laser-induced dissociation experiments. The Royal Society of Chemistry 2021-09-10 /pmc/articles/PMC8513815/ /pubmed/34745549 http://dx.doi.org/10.1039/d1sc02885e Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Li, Wen
Kavatsyuk, Oksana
Douma, Wessel
Wang, Xin
Hoekstra, Ronnie
Mayer, Dennis
Robinson, Matthew S.
Gühr, Markus
Lalande, Mathieu
Abdelmouleh, Marwa
Ryszka, Michal
Poully, Jean Christophe
Schlathölter, Thomas
Multiple valence electron detachment following Auger decay of inner-shell vacancies in gas-phase DNA
title Multiple valence electron detachment following Auger decay of inner-shell vacancies in gas-phase DNA
title_full Multiple valence electron detachment following Auger decay of inner-shell vacancies in gas-phase DNA
title_fullStr Multiple valence electron detachment following Auger decay of inner-shell vacancies in gas-phase DNA
title_full_unstemmed Multiple valence electron detachment following Auger decay of inner-shell vacancies in gas-phase DNA
title_short Multiple valence electron detachment following Auger decay of inner-shell vacancies in gas-phase DNA
title_sort multiple valence electron detachment following auger decay of inner-shell vacancies in gas-phase dna
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8513815/
https://www.ncbi.nlm.nih.gov/pubmed/34745549
http://dx.doi.org/10.1039/d1sc02885e
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