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RNA-seq of peripheral blood mononuclear cells of congenital generalized lipodystrophy type 2 patients

Illumina RNA-seq analysis was used to characterize the whole transcriptomes of peripheral blood mononuclear cells (PBMCs) from patients with congenital generalized lipodystrophy. RNA-seq information for seven patients with type 2 congenital generalized lipodystrophy (CGL2; Berardinelli-Seip congenit...

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Autores principales: Huang, Yen-Hua, Su, Tzu-Chien, Wang, Chung-Hsing, Wong, Siew-Lee, Chien, Yin-Hsiu, Wang, Yu-Tai, Hwu, Wuh-Liang, Lee, Ni-Chung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8514467/
https://www.ncbi.nlm.nih.gov/pubmed/34645804
http://dx.doi.org/10.1038/s41597-021-01040-4
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author Huang, Yen-Hua
Su, Tzu-Chien
Wang, Chung-Hsing
Wong, Siew-Lee
Chien, Yin-Hsiu
Wang, Yu-Tai
Hwu, Wuh-Liang
Lee, Ni-Chung
author_facet Huang, Yen-Hua
Su, Tzu-Chien
Wang, Chung-Hsing
Wong, Siew-Lee
Chien, Yin-Hsiu
Wang, Yu-Tai
Hwu, Wuh-Liang
Lee, Ni-Chung
author_sort Huang, Yen-Hua
collection PubMed
description Illumina RNA-seq analysis was used to characterize the whole transcriptomes of peripheral blood mononuclear cells (PBMCs) from patients with congenital generalized lipodystrophy. RNA-seq information for seven patients with type 2 congenital generalized lipodystrophy (CGL2; Berardinelli-Seip congenital lipodystrophy, BSCL2) was obtained and compared with similar information for seven age- and sex-matched healthy control subjects. All seven CGL2 patients carried biallelic pathogenic mutations affecting the BSCL2 gene and had clinical symptoms of varying severity. The findings provide the whole-transcriptome signatures of PBMCs of CGL2 patients, allowing further exploration of gene expression patterns/signatures associated with the various clinical symptoms of patients with this disease.
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spelling pubmed-85144672021-10-29 RNA-seq of peripheral blood mononuclear cells of congenital generalized lipodystrophy type 2 patients Huang, Yen-Hua Su, Tzu-Chien Wang, Chung-Hsing Wong, Siew-Lee Chien, Yin-Hsiu Wang, Yu-Tai Hwu, Wuh-Liang Lee, Ni-Chung Sci Data Data Descriptor Illumina RNA-seq analysis was used to characterize the whole transcriptomes of peripheral blood mononuclear cells (PBMCs) from patients with congenital generalized lipodystrophy. RNA-seq information for seven patients with type 2 congenital generalized lipodystrophy (CGL2; Berardinelli-Seip congenital lipodystrophy, BSCL2) was obtained and compared with similar information for seven age- and sex-matched healthy control subjects. All seven CGL2 patients carried biallelic pathogenic mutations affecting the BSCL2 gene and had clinical symptoms of varying severity. The findings provide the whole-transcriptome signatures of PBMCs of CGL2 patients, allowing further exploration of gene expression patterns/signatures associated with the various clinical symptoms of patients with this disease. Nature Publishing Group UK 2021-10-13 /pmc/articles/PMC8514467/ /pubmed/34645804 http://dx.doi.org/10.1038/s41597-021-01040-4 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) applies to the metadata files associated with this article.
spellingShingle Data Descriptor
Huang, Yen-Hua
Su, Tzu-Chien
Wang, Chung-Hsing
Wong, Siew-Lee
Chien, Yin-Hsiu
Wang, Yu-Tai
Hwu, Wuh-Liang
Lee, Ni-Chung
RNA-seq of peripheral blood mononuclear cells of congenital generalized lipodystrophy type 2 patients
title RNA-seq of peripheral blood mononuclear cells of congenital generalized lipodystrophy type 2 patients
title_full RNA-seq of peripheral blood mononuclear cells of congenital generalized lipodystrophy type 2 patients
title_fullStr RNA-seq of peripheral blood mononuclear cells of congenital generalized lipodystrophy type 2 patients
title_full_unstemmed RNA-seq of peripheral blood mononuclear cells of congenital generalized lipodystrophy type 2 patients
title_short RNA-seq of peripheral blood mononuclear cells of congenital generalized lipodystrophy type 2 patients
title_sort rna-seq of peripheral blood mononuclear cells of congenital generalized lipodystrophy type 2 patients
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8514467/
https://www.ncbi.nlm.nih.gov/pubmed/34645804
http://dx.doi.org/10.1038/s41597-021-01040-4
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