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Machine Learning for Subtyping Concussion Using a Clustering Approach
Background: Concussion subtypes are typically organized into commonly affected symptom areas or a combination of affected systems, an approach that may be flawed by bias in conceptualization or the inherent limitations of interdisciplinary expertise. Objective: The purpose of this study was to deter...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8514654/ https://www.ncbi.nlm.nih.gov/pubmed/34658816 http://dx.doi.org/10.3389/fnhum.2021.716643 |
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author | Rosenblatt, Cirelle K. Harriss, Alexandra Babul, Aliya-Nur Rosenblatt, Samuel A. |
author_facet | Rosenblatt, Cirelle K. Harriss, Alexandra Babul, Aliya-Nur Rosenblatt, Samuel A. |
author_sort | Rosenblatt, Cirelle K. |
collection | PubMed |
description | Background: Concussion subtypes are typically organized into commonly affected symptom areas or a combination of affected systems, an approach that may be flawed by bias in conceptualization or the inherent limitations of interdisciplinary expertise. Objective: The purpose of this study was to determine whether a bottom-up, unsupervised, machine learning approach, could more accurately support concussion subtyping. Methods: Initial patient intake data as well as objective outcome measures including, the Patient-Reported Outcomes Measurement Information System (PROMIS), Dizziness Handicap Inventory (DHI), Pain Catastrophizing Scale (PCS), and Immediate Post-Concussion Assessment and Cognitive Testing Tool (ImPACT) were retrospectively extracted from the Advance Concussion Clinic's database. A correlation matrix and principal component analysis (PCA) were used to reduce the dimensionality of the dataset. Sklearn's agglomerative clustering algorithm was then applied, and the optimal number of clusters within the patient database were generated. Between-group comparisons among the formed clusters were performed using a Mann-Whitney U test. Results: Two hundred seventy-five patients within the clinics database were analyzed. Five distinct clusters emerged from the data when maximizing the Silhouette score (0.36) and minimizing the Davies-Bouldin score (0.83). Concussion subtypes derived demonstrated clinically distinct profiles, with statistically significant differences (p < 0.05) between all five clusters. Conclusion: This machine learning approach enabled the identification and characterization of five distinct concussion subtypes, which were best understood according to levels of complexity, ranging from Extremely Complex to Minimally Complex. Understanding concussion in terms of Complexity with the utilization of artificial intelligence, could provide a more accurate concussion classification or subtype approach; one that better reflects the true heterogeneity and complex system disruptions associated with mild traumatic brain injury. |
format | Online Article Text |
id | pubmed-8514654 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-85146542021-10-15 Machine Learning for Subtyping Concussion Using a Clustering Approach Rosenblatt, Cirelle K. Harriss, Alexandra Babul, Aliya-Nur Rosenblatt, Samuel A. Front Hum Neurosci Human Neuroscience Background: Concussion subtypes are typically organized into commonly affected symptom areas or a combination of affected systems, an approach that may be flawed by bias in conceptualization or the inherent limitations of interdisciplinary expertise. Objective: The purpose of this study was to determine whether a bottom-up, unsupervised, machine learning approach, could more accurately support concussion subtyping. Methods: Initial patient intake data as well as objective outcome measures including, the Patient-Reported Outcomes Measurement Information System (PROMIS), Dizziness Handicap Inventory (DHI), Pain Catastrophizing Scale (PCS), and Immediate Post-Concussion Assessment and Cognitive Testing Tool (ImPACT) were retrospectively extracted from the Advance Concussion Clinic's database. A correlation matrix and principal component analysis (PCA) were used to reduce the dimensionality of the dataset. Sklearn's agglomerative clustering algorithm was then applied, and the optimal number of clusters within the patient database were generated. Between-group comparisons among the formed clusters were performed using a Mann-Whitney U test. Results: Two hundred seventy-five patients within the clinics database were analyzed. Five distinct clusters emerged from the data when maximizing the Silhouette score (0.36) and minimizing the Davies-Bouldin score (0.83). Concussion subtypes derived demonstrated clinically distinct profiles, with statistically significant differences (p < 0.05) between all five clusters. Conclusion: This machine learning approach enabled the identification and characterization of five distinct concussion subtypes, which were best understood according to levels of complexity, ranging from Extremely Complex to Minimally Complex. Understanding concussion in terms of Complexity with the utilization of artificial intelligence, could provide a more accurate concussion classification or subtype approach; one that better reflects the true heterogeneity and complex system disruptions associated with mild traumatic brain injury. Frontiers Media S.A. 2021-09-30 /pmc/articles/PMC8514654/ /pubmed/34658816 http://dx.doi.org/10.3389/fnhum.2021.716643 Text en Copyright © 2021 Rosenblatt, Harriss, Babul and Rosenblatt. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Human Neuroscience Rosenblatt, Cirelle K. Harriss, Alexandra Babul, Aliya-Nur Rosenblatt, Samuel A. Machine Learning for Subtyping Concussion Using a Clustering Approach |
title | Machine Learning for Subtyping Concussion Using a Clustering Approach |
title_full | Machine Learning for Subtyping Concussion Using a Clustering Approach |
title_fullStr | Machine Learning for Subtyping Concussion Using a Clustering Approach |
title_full_unstemmed | Machine Learning for Subtyping Concussion Using a Clustering Approach |
title_short | Machine Learning for Subtyping Concussion Using a Clustering Approach |
title_sort | machine learning for subtyping concussion using a clustering approach |
topic | Human Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8514654/ https://www.ncbi.nlm.nih.gov/pubmed/34658816 http://dx.doi.org/10.3389/fnhum.2021.716643 |
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