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Diagnosis of Lung Cancer by ATR-FTIR Spectroscopy and Chemometrics
Lung cancer is the leading cause of cancer-related death in the world. Early diagnosis has great significance for the survival of patients with lung cancer. In this paper, attenuated total reflectance Fourier transform infrared (ATR-FTIR) spectroscopy combined with chemometrics was used to study the...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8515056/ https://www.ncbi.nlm.nih.gov/pubmed/34660320 http://dx.doi.org/10.3389/fonc.2021.753791 |
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author | Yang, Xien Ou, Quanhong Qian, Kai Yang, Jianru Bai, Zhixun Yang, Weiye Shi, Youming Liu, Gang |
author_facet | Yang, Xien Ou, Quanhong Qian, Kai Yang, Jianru Bai, Zhixun Yang, Weiye Shi, Youming Liu, Gang |
author_sort | Yang, Xien |
collection | PubMed |
description | Lung cancer is the leading cause of cancer-related death in the world. Early diagnosis has great significance for the survival of patients with lung cancer. In this paper, attenuated total reflectance Fourier transform infrared (ATR-FTIR) spectroscopy combined with chemometrics was used to study the serum samples from patients with lung cancer and healthy people. The results of spectral band area comparison showed that the concentrations of protein, lipid and nucleic acids molecules in serum of patients with lung cancer were increased compared with those in healthy people. The original spectra were preprocessed to improve the accuracy of principal component regression (PCR) and partial least squares-discriminant analysis (PLS-DA) models. PLS-DA results for first derivative spectral data in nucleic acids (1250-1000cm(-1)) band showed 80% sensitivity, 91.89% specificity and 87.10% accuracy with high [Formula: see text] of 0.8949 and [Formula: see text] of 0.8153, low RMSEC of 0.3136 and RMSEV of 0.4180. It is shown that ATR-FTIR spectroscopy combined with chemometrics might be developed as a simple method for clinical screening and diagnosis of lung cancer. |
format | Online Article Text |
id | pubmed-8515056 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-85150562021-10-15 Diagnosis of Lung Cancer by ATR-FTIR Spectroscopy and Chemometrics Yang, Xien Ou, Quanhong Qian, Kai Yang, Jianru Bai, Zhixun Yang, Weiye Shi, Youming Liu, Gang Front Oncol Oncology Lung cancer is the leading cause of cancer-related death in the world. Early diagnosis has great significance for the survival of patients with lung cancer. In this paper, attenuated total reflectance Fourier transform infrared (ATR-FTIR) spectroscopy combined with chemometrics was used to study the serum samples from patients with lung cancer and healthy people. The results of spectral band area comparison showed that the concentrations of protein, lipid and nucleic acids molecules in serum of patients with lung cancer were increased compared with those in healthy people. The original spectra were preprocessed to improve the accuracy of principal component regression (PCR) and partial least squares-discriminant analysis (PLS-DA) models. PLS-DA results for first derivative spectral data in nucleic acids (1250-1000cm(-1)) band showed 80% sensitivity, 91.89% specificity and 87.10% accuracy with high [Formula: see text] of 0.8949 and [Formula: see text] of 0.8153, low RMSEC of 0.3136 and RMSEV of 0.4180. It is shown that ATR-FTIR spectroscopy combined with chemometrics might be developed as a simple method for clinical screening and diagnosis of lung cancer. Frontiers Media S.A. 2021-09-30 /pmc/articles/PMC8515056/ /pubmed/34660320 http://dx.doi.org/10.3389/fonc.2021.753791 Text en Copyright © 2021 Yang, Ou, Qian, Yang, Bai, Yang, Shi and Liu https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Yang, Xien Ou, Quanhong Qian, Kai Yang, Jianru Bai, Zhixun Yang, Weiye Shi, Youming Liu, Gang Diagnosis of Lung Cancer by ATR-FTIR Spectroscopy and Chemometrics |
title | Diagnosis of Lung Cancer by ATR-FTIR Spectroscopy and Chemometrics |
title_full | Diagnosis of Lung Cancer by ATR-FTIR Spectroscopy and Chemometrics |
title_fullStr | Diagnosis of Lung Cancer by ATR-FTIR Spectroscopy and Chemometrics |
title_full_unstemmed | Diagnosis of Lung Cancer by ATR-FTIR Spectroscopy and Chemometrics |
title_short | Diagnosis of Lung Cancer by ATR-FTIR Spectroscopy and Chemometrics |
title_sort | diagnosis of lung cancer by atr-ftir spectroscopy and chemometrics |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8515056/ https://www.ncbi.nlm.nih.gov/pubmed/34660320 http://dx.doi.org/10.3389/fonc.2021.753791 |
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