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Characterization of protein–ligand interactions by SABRE

Nuclear spin hyperpolarization through signal amplification by reversible exchange (SABRE), the non-hydrogenative version of para-hydrogen induced polarization, is demonstrated to enhance sensitivity for the detection of biomacromolecular interactions. A target ligand for the enzyme trypsin includes...

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Detalles Bibliográficos
Autores principales: Mandal, Ratnamala, Pham, Pierce, Hilty, Christian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8515190/
https://www.ncbi.nlm.nih.gov/pubmed/34745525
http://dx.doi.org/10.1039/d1sc03404a
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author Mandal, Ratnamala
Pham, Pierce
Hilty, Christian
author_facet Mandal, Ratnamala
Pham, Pierce
Hilty, Christian
author_sort Mandal, Ratnamala
collection PubMed
description Nuclear spin hyperpolarization through signal amplification by reversible exchange (SABRE), the non-hydrogenative version of para-hydrogen induced polarization, is demonstrated to enhance sensitivity for the detection of biomacromolecular interactions. A target ligand for the enzyme trypsin includes the binding motif for the protein, and at a distant location a heterocyclic nitrogen atom for interacting with a SABRE polarization transfer catalyst. This molecule, 4-amidinopyridine, is hyperpolarized with 50% para-hydrogen to yield enhancement values ranging from −87 and −34 in the ortho and meta positions of the heterocyclic nitrogen, to −230 and −110, for different solution conditions. Ligand binding is identified by flow-NMR, in a two-step process that separately optimizes the polarization transfer in methanol while detecting the interaction in a predominantly aqueous medium. A single scan Carr–Purcell–Meiboom–Gill (CPMG) experiment identifies binding by the change in R(2) relaxation rate. The SABRE hyperpolarization technique provides a cost effective means to enhance NMR of biological systems, for the identification of protein–ligand interactions and other applications.
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spelling pubmed-85151902021-11-04 Characterization of protein–ligand interactions by SABRE Mandal, Ratnamala Pham, Pierce Hilty, Christian Chem Sci Chemistry Nuclear spin hyperpolarization through signal amplification by reversible exchange (SABRE), the non-hydrogenative version of para-hydrogen induced polarization, is demonstrated to enhance sensitivity for the detection of biomacromolecular interactions. A target ligand for the enzyme trypsin includes the binding motif for the protein, and at a distant location a heterocyclic nitrogen atom for interacting with a SABRE polarization transfer catalyst. This molecule, 4-amidinopyridine, is hyperpolarized with 50% para-hydrogen to yield enhancement values ranging from −87 and −34 in the ortho and meta positions of the heterocyclic nitrogen, to −230 and −110, for different solution conditions. Ligand binding is identified by flow-NMR, in a two-step process that separately optimizes the polarization transfer in methanol while detecting the interaction in a predominantly aqueous medium. A single scan Carr–Purcell–Meiboom–Gill (CPMG) experiment identifies binding by the change in R(2) relaxation rate. The SABRE hyperpolarization technique provides a cost effective means to enhance NMR of biological systems, for the identification of protein–ligand interactions and other applications. The Royal Society of Chemistry 2021-08-31 /pmc/articles/PMC8515190/ /pubmed/34745525 http://dx.doi.org/10.1039/d1sc03404a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Mandal, Ratnamala
Pham, Pierce
Hilty, Christian
Characterization of protein–ligand interactions by SABRE
title Characterization of protein–ligand interactions by SABRE
title_full Characterization of protein–ligand interactions by SABRE
title_fullStr Characterization of protein–ligand interactions by SABRE
title_full_unstemmed Characterization of protein–ligand interactions by SABRE
title_short Characterization of protein–ligand interactions by SABRE
title_sort characterization of protein–ligand interactions by sabre
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8515190/
https://www.ncbi.nlm.nih.gov/pubmed/34745525
http://dx.doi.org/10.1039/d1sc03404a
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