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Multiscale Modeling of Electronic Spectra Including Nuclear Quantum Effects
[Image: see text] Theoretical prediction of electronic absorption spectra without input from experiments is no easy feat, as it requires addressing all of the factors that affect line shapes. In practice, however, the methodologies are limited to treat these ingredients only to a certain extent. Her...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8515811/ https://www.ncbi.nlm.nih.gov/pubmed/34582200 http://dx.doi.org/10.1021/acs.jctc.1c00531 |
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author | Fehér, Péter P. Madarász, Ádám Stirling, András |
author_facet | Fehér, Péter P. Madarász, Ádám Stirling, András |
author_sort | Fehér, Péter P. |
collection | PubMed |
description | [Image: see text] Theoretical prediction of electronic absorption spectra without input from experiments is no easy feat, as it requires addressing all of the factors that affect line shapes. In practice, however, the methodologies are limited to treat these ingredients only to a certain extent. Here, we present a multiscale protocol that addresses the temperature, solvent, and nuclear quantum effects as well as anharmonicity and the reconstruction of the final spectra from individual transitions. First, quantum mechanics/molecular mechanics (QM/MM) molecular dynamics is conducted to obtain trajectories of solute–solvent configurations, from which the corresponding quantum-corrected ensembles are generated through the generalized smoothed trajectory analysis (GSTA). The optical spectra of the ensembles are then produced by calculating vertical transitions using time-dependent density-functional theory (TDDFT) with implicit solvation. To obtain the final spectral shapes, the stick spectra from TDDFT are convoluted with Gaussian kernels where the half-widths are determined by a statistically motivated strategy. We have tested our method by calculating the UV–vis spectra of a recently discovered acridine photocatalyst in two redox states. Vibronic progressions and broadenings due to the finite lifetime of the excited states are not included in the methodology yet. Nuclear quantization affects the relative peak intensities and widths, which is necessary to reproduce the experimental spectrum. We have also found that using only the optimized geometry of each molecule works surprisingly well if a proper empirical broadening factor is applied. This is explained by the rigidity of the conjugated chromophore moieties of the selected molecules, which are mainly responsible for the excitations in the spectra. In contrast, we have also shown that other parts of the molecules are flexible enough to feature anharmonicities that impair the use of other techniques such as Wigner sampling. |
format | Online Article Text |
id | pubmed-8515811 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-85158112021-10-15 Multiscale Modeling of Electronic Spectra Including Nuclear Quantum Effects Fehér, Péter P. Madarász, Ádám Stirling, András J Chem Theory Comput [Image: see text] Theoretical prediction of electronic absorption spectra without input from experiments is no easy feat, as it requires addressing all of the factors that affect line shapes. In practice, however, the methodologies are limited to treat these ingredients only to a certain extent. Here, we present a multiscale protocol that addresses the temperature, solvent, and nuclear quantum effects as well as anharmonicity and the reconstruction of the final spectra from individual transitions. First, quantum mechanics/molecular mechanics (QM/MM) molecular dynamics is conducted to obtain trajectories of solute–solvent configurations, from which the corresponding quantum-corrected ensembles are generated through the generalized smoothed trajectory analysis (GSTA). The optical spectra of the ensembles are then produced by calculating vertical transitions using time-dependent density-functional theory (TDDFT) with implicit solvation. To obtain the final spectral shapes, the stick spectra from TDDFT are convoluted with Gaussian kernels where the half-widths are determined by a statistically motivated strategy. We have tested our method by calculating the UV–vis spectra of a recently discovered acridine photocatalyst in two redox states. Vibronic progressions and broadenings due to the finite lifetime of the excited states are not included in the methodology yet. Nuclear quantization affects the relative peak intensities and widths, which is necessary to reproduce the experimental spectrum. We have also found that using only the optimized geometry of each molecule works surprisingly well if a proper empirical broadening factor is applied. This is explained by the rigidity of the conjugated chromophore moieties of the selected molecules, which are mainly responsible for the excitations in the spectra. In contrast, we have also shown that other parts of the molecules are flexible enough to feature anharmonicities that impair the use of other techniques such as Wigner sampling. American Chemical Society 2021-09-28 2021-10-12 /pmc/articles/PMC8515811/ /pubmed/34582200 http://dx.doi.org/10.1021/acs.jctc.1c00531 Text en © 2021 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Fehér, Péter P. Madarász, Ádám Stirling, András Multiscale Modeling of Electronic Spectra Including Nuclear Quantum Effects |
title | Multiscale Modeling of Electronic Spectra Including
Nuclear Quantum Effects |
title_full | Multiscale Modeling of Electronic Spectra Including
Nuclear Quantum Effects |
title_fullStr | Multiscale Modeling of Electronic Spectra Including
Nuclear Quantum Effects |
title_full_unstemmed | Multiscale Modeling of Electronic Spectra Including
Nuclear Quantum Effects |
title_short | Multiscale Modeling of Electronic Spectra Including
Nuclear Quantum Effects |
title_sort | multiscale modeling of electronic spectra including
nuclear quantum effects |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8515811/ https://www.ncbi.nlm.nih.gov/pubmed/34582200 http://dx.doi.org/10.1021/acs.jctc.1c00531 |
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